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Identifier: 16120302

GI number: 16120302

Start: 323341

End: 324345

Strand: Reverse

Name: Not Available

Synonym: VNG6421H

Alternate gene names: NA

Gene position: 324345-323341 (Counterclockwise)

Preceding gene: 16120303

Following gene: 16120301

Centisome position: 88.76

GC content: 59.4

Gene sequence:

>1005_bases
ATGCTGAGGTGGATGAGTCCAGCGACCCTGCAGGATGATCCTTCGGTAGACTCGTTCTTCAATGTCGTGGAGACCGAGAC
GCTAGCGCTGTTCGAGCACCTCTCCTTCGAGTTTCTCGAAGAGTTCGACGTGTTCGCCCCGGCGGAGACGGGGCGAACAC
GGGACCACGAACCACCAGAGCTGATGCGTGGGTTTCTCCACTGCTACTACAAGGACATCTACGGCATTCGTCCCGTTGAA
CGAGAACTTCGGAACACGGTTGTCTGGCTGAGCTGTGGCTTCGATCGACCGCCGTCGAGAGACGCGGTCGATCGCTTCCT
TACGGACCTCGAACACGTCGTCAACAAGGTTTTCGACCACCTCGTTGAGCAGGCCGCCCTACGGGGCCTGCTCGATTTGA
CCTACTGCATTGATTCAACTGACGTGAGGGCGATGCCTGCCGATCAAGATGCGTCGAAGTGCTACGATCCAACTGACGAC
GAGTACTACCACGGCTACGGCTGTACAATCGTCTCGACCGGGCAAAAGATCCCGATCGCGGCGGAGTTCACAGAGAGTAA
ACAAGCGCCAGAGGAGACGGCGATGCGCGTCACGCGTGACGCGCTCGCCGTCGCCAAGCCGATCTGGATGGTCGGTGACA
GCGCCTACGACACGCTTGACTGGCACGACCACCTGCTGGCCGCAGGGGTCGTGCCAGTCGCCCCATACAACGCGCGAAAC
ACCGACGACCCGAAAGACATCGAGTACAGGGTCGAAGACCGCATCGAACAACACAGCGAGGACGTTCAGCTGAAGCAATC
CACGTTGGATGAGACGTACAACCGCCGTACTGGAGTCGAACGAACCAATGAATCAGTGAAGGACTGCGGCCTCGGGCGAA
CGCATGCCCGAGGCCGCGTTCACGCACGAGCGCAGGTGTTCCTCGCTCTGTGCCTTCGTCTCGTCGTCGCAATCACCAAC
TACGAACGCGGAGACAATCCGGGAAGCCCGATCATCACGGTGTGA

Upstream 100 bases:

>100_bases
ACGAATCAACGGTGTAGCAGCCAGCCATGTCCGTTGCGATACTGAATACCGAACCTGAGAGGGTGTCATAGAACGAGTAG
CACACCAAAGAGCAGGGTGA

Downstream 100 bases:

>100_bases
CAAGACTTCTATGACACCCTCTTCTCCATGCTACCAGAGCTTACTTGTTCAATACTGAGCCCCATCATCGGATAAAGGCT
CGCAAAATTTCTTTAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLRWMSPATLQDDPSVDSFFNVVETETLALFEHLSFEFLEEFDVFAPAETGRTRDHEPPELMRGFLHCYYKDIYGIRPVE
RELRNTVVWLSCGFDRPPSRDAVDRFLTDLEHVVNKVFDHLVEQAALRGLLDLTYCIDSTDVRAMPADQDASKCYDPTDD
EYYHGYGCTIVSTGQKIPIAAEFTESKQAPEETAMRVTRDALAVAKPIWMVGDSAYDTLDWHDHLLAAGVVPVAPYNARN
TDDPKDIEYRVEDRIEQHSEDVQLKQSTLDETYNRRTGVERTNESVKDCGLGRTHARGRVHARAQVFLALCLRLVVAITN
YERGDNPGSPIITV

Sequences:

>Translated_334_residues
MLRWMSPATLQDDPSVDSFFNVVETETLALFEHLSFEFLEEFDVFAPAETGRTRDHEPPELMRGFLHCYYKDIYGIRPVE
RELRNTVVWLSCGFDRPPSRDAVDRFLTDLEHVVNKVFDHLVEQAALRGLLDLTYCIDSTDVRAMPADQDASKCYDPTDD
EYYHGYGCTIVSTGQKIPIAAEFTESKQAPEETAMRVTRDALAVAKPIWMVGDSAYDTLDWHDHLLAAGVVPVAPYNARN
TDDPKDIEYRVEDRIEQHSEDVQLKQSTLDETYNRRTGVERTNESVKDCGLGRTHARGRVHARAQVFLALCLRLVVAITN
YERGDNPGSPIITV
>Mature_334_residues
MLRWMSPATLQDDPSVDSFFNVVETETLALFEHLSFEFLEEFDVFAPAETGRTRDHEPPELMRGFLHCYYKDIYGIRPVE
RELRNTVVWLSCGFDRPPSRDAVDRFLTDLEHVVNKVFDHLVEQAALRGLLDLTYCIDSTDVRAMPADQDASKCYDPTDD
EYYHGYGCTIVSTGQKIPIAAEFTESKQAPEETAMRVTRDALAVAKPIWMVGDSAYDTLDWHDHLLAAGVVPVAPYNARN
TDDPKDIEYRVEDRIEQHSEDVQLKQSTLDETYNRRTGVERTNESVKDCGLGRTHARGRVHARAQVFLALCLRLVVAITN
YERGDNPGSPIITV

Specific function: Involved in the transposition of the insertion sequence ISH11

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TH11_HALSA (P23464)

Other databases:

- EMBL:   X54752
- EMBL:   AE004437
- EMBL:   AF016485
- EMBL:   AF016485
- EMBL:   AE004438
- EMBL:   AE004438
- EMBL:   AE004438
- PIR:   H84181
- PIR:   T08253
- RefSeq:   NP_045981.1
- RefSeq:   NP_046118.1
- RefSeq:   NP_279340.1
- RefSeq:   NP_395603.1
- RefSeq:   NP_395890.1
- RefSeq:   NP_395935.1
- GeneID:   1446823
- GeneID:   1446947
- GeneID:   1447129
- GeneID:   1449207
- GeneID:   1449400
- GeneID:   1449445
- GenomeReviews:   AE004437_GR
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AF016485_GR
- GenomeReviews:   AF016485_GR
- KEGG:   hal:VNG0213H
- KEGG:   hal:VNG6043H
- KEGG:   hal:VNG6421H
- KEGG:   hal:VNG6483H
- HOGENOM:   HBG496912
- OMA:   PVTRELQ
- ProtClustDB:   CLSK539594
- BioCyc:   HSP64091:H0448-MONOMER
- BioCyc:   HSP64091:H1909-MONOMER
- BioCyc:   HSP64091:VNG0213H-MONOMER
- BioCyc:   HSP64091:VNG6043H-MONOMER
- BioCyc:   HSP64091:VNG6421H-MONOMER
- BioCyc:   HSP64091:VNG6483H-MONOMER
- InterPro:   IPR002559

Pfam domain/function: PF01609 Transposase_11

EC number: NA

Molecular weight: Translated: 37964; Mature: 37964

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRWMSPATLQDDPSVDSFFNVVETETLALFEHLSFEFLEEFDVFAPAETGRTRDHEPPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
LMRGFLHCYYKDIYGIRPVERELRNTVVWLSCGFDRPPSRDAVDRFLTDLEHVVNKVFDH
HHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LVEQAALRGLLDLTYCIDSTDVRAMPADQDASKCYDPTDDEYYHGYGCTIVSTGQKIPIA
HHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCEECCCCCEEEECCCCCCEE
AEFTESKQAPEETAMRVTRDALAVAKPIWMVGDSAYDTLDWHDHLLAAGVVPVAPYNARN
EECHHCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHHHCCCCCCCCCCCC
TDDPKDIEYRVEDRIEQHSEDVQLKQSTLDETYNRRTGVERTNESVKDCGLGRTHARGRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHH
HARAQVFLALCLRLVVAITNYERGDNPGSPIITV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
>Mature Secondary Structure
MLRWMSPATLQDDPSVDSFFNVVETETLALFEHLSFEFLEEFDVFAPAETGRTRDHEPPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
LMRGFLHCYYKDIYGIRPVERELRNTVVWLSCGFDRPPSRDAVDRFLTDLEHVVNKVFDH
HHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LVEQAALRGLLDLTYCIDSTDVRAMPADQDASKCYDPTDDEYYHGYGCTIVSTGQKIPIA
HHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCEECCCCCEEEECCCCCCEE
AEFTESKQAPEETAMRVTRDALAVAKPIWMVGDSAYDTLDWHDHLLAAGVVPVAPYNARN
EECHHCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHHHCCCCCCCCCCCC
TDDPKDIEYRVEDRIEQHSEDVQLKQSTLDETYNRRTGVERTNESVKDCGLGRTHARGRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHH
HARAQVFLALCLRLVVAITNYERGDNPGSPIITV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2174546; 9847077; 11016950