| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120300
GI number: 16120300
Start: 322067
End: 322357
Strand: Reverse
Name: Not Available
Synonym: VNG6419H
Alternate gene names: NA
Gene position: 322357-322067 (Counterclockwise)
Preceding gene: 16120301
Following gene: 16120299
Centisome position: 88.21
GC content: 67.01
Gene sequence:
>291_bases ATGCCTGGTCTCGATCCGCACGACGACACGAGTCGCGACTACGAACAGTTCGAGAAAGAACAGCTCGCCCTGGACCGTGA CGCCACCAGCGTCGACACGGCGGACGTCGACGACAGGACGGCCCAGCGCCTGGTCAGCGACCTCGTCGACGCGGACGTCG TCACTCCGGTTCCCGAGGACCAAGTTCTGGTTCACGAGCCGAGCGGCACCACGTTCGACTCATCGACGCAGCTGGCCGTC TTCCACCGTGGCTGGACGGCCGGCCGCGACGCCGACACGGAGGGCGAGTGA
Upstream 100 bases:
>100_bases CCCCAGAACGCGGAGCGTTCTGGTGTGCGCACGAGAACGCTGTTTCTCGTGCACGCCGGGAGGCGTGCAGCGCGCGACAG CGTGCGCTGCGTGACTCACC
Downstream 100 bases:
>100_bases TGCAGCAGACCCTCGTCGGCTGCGCTTTTTGCGACGCGCCGCCCGGTACGGAGACTGGCGAGGCCCACACCTGGGGGCAA GACGAACGGGTCACCCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPGLDPHDDTSRDYEQFEKEQLALDRDATSVDTADVDDRTAQRLVSDLVDADVVTPVPEDQVLVHEPSGTTFDSSTQLAV FHRGWTAGRDADTEGE
Sequences:
>Translated_96_residues MPGLDPHDDTSRDYEQFEKEQLALDRDATSVDTADVDDRTAQRLVSDLVDADVVTPVPEDQVLVHEPSGTTFDSSTQLAV FHRGWTAGRDADTEGE >Mature_95_residues PGLDPHDDTSRDYEQFEKEQLALDRDATSVDTADVDDRTAQRLVSDLVDADVVTPVPEDQVLVHEPSGTTFDSSTQLAVF HRGWTAGRDADTEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10574; Mature: 10443
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLDPHDDTSRDYEQFEKEQLALDRDATSVDTADVDDRTAQRLVSDLVDADVVTPVPED CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC QVLVHEPSGTTFDSSTQLAVFHRGWTAGRDADTEGE CEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure PGLDPHDDTSRDYEQFEKEQLALDRDATSVDTADVDDRTAQRLVSDLVDADVVTPVPED CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC QVLVHEPSGTTFDSSTQLAVFHRGWTAGRDADTEGE CEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA