Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16120228

GI number: 16120228

Start: 250596

End: 252485

Strand: Direct

Name: Not Available

Synonym: VNG6320C

Alternate gene names: NA

Gene position: 250596-252485 (Clockwise)

Preceding gene: 16120227

Following gene: 16120231

Centisome position: 68.58

GC content: 59.26

Gene sequence:

>1890_bases
ATGTGGAACGTAGATGTAACTTGCATCGGTGGCATTCGTTCCGGCGAGGCAACACTGCGCCCCGGCCCAAACATCGTTCA
AGCTTCGAACTTCCAGGGCAAATCGAGTTTCCTCGCTGCGATCCAGACCGCAATCGGAACCACCGGGCTGCTCACAGAGG
ATCACCCGTTGATGGAGAACGAAGACGACGGCAAGGTCACGCTTGAAACCGACGAAGAGACGTACACCGTCTCTCTCACG
CGAGCGACCGACAGCGACGAACCCGCGATCTCGCGCAGCGGAACGCCATATCTCACACGAGACCAAGACCAGATCGCTGC
TCGCTTGTTTGCTGTTCTGGGCGAGGACAATCCCATCCGTGCCGCCGTGCGGGAGGAAAACCAAGAACGCCTGACCGAGC
TCTTGAAGAAGCCGCTTGAGACTGAGAACATCGACCTGCGTATCGAGGCGCTCCAACGCGAGATCAAGGAGCTCGAAGAC
GAAGTCGCCGCAGCCGAAGCCGCCTCCGCGGACCTGCCCGCGGCACAGCAGAAAGTGACGCGGCTCCAAGGGGAGCTTCG
CGACCTCAACGAGACACGTGACGAACTCGAACGTAAGGTCGACGAAGAAACCGATCAGCGCGCCCTCCGGGACGAACTGA
CGGCCAAACAGTCGGATCTCGAACGCGAGGAGGCCCGCCTCGAACGCCTCGAAAACCAGGTCGACCGCCGGAAAGCGCAA
CTCGACGACAAGGAGGCGGCGCTCGAATCACTCGACATCCCAGACTCCCCCACAGCAGAGGCGGACATCGCCGAAAAGCA
GACCCGAATCGACGAATTAGCAGTGAAAATCGACCTGCTTGACGATCTCCACCGCAGCACCAAGGCGATCATCGACGAGG
GAGAAATAGATCTCATAACGGACGTCGAACGCACCCTCTCCGGGGACACGTTCTCGTGTTTCGTCTGCGGCGCGGAGACC
ACGGCGGAAGCGGTCACCGAGCGGCTGAACGAGATCAGTGACCGACAGGAATCGTTGCGGGAACAGCGGGCCACGCTCAC
CGAGGAGGTGACTCAGATGCAGCAACGAACGCGTGAGATCGAGTCGAAGCGACAGCAAAAGGCAGAGCTCGAAGACGAGA
TCAAACGACTCCGCGTCGATATTCAGGAGGACCAACACGAGGTCCGGTCGATCGAAGCGACCATCGAGGAGCTTCAGGCG
GAGATCGAACAACGCGAAGCCGAGTACGAAGCGGCTGAGAAGGCGGGCGAATCGCACAGCGCCGAACTGAAAACGATCCA
GCAGAAGATCGGCAGCACGGAAACCAAGTTGGATCGAGCCCAAGCCGAACTCGAGCGTATCGAAGCGGAACTGCAGAAGC
GAAACGACCGCCAAGAACAGCTGGAGACGAAGCGAGACGAGCTTGAAACCCTCAGACAGCGCCGGAAACAGAAGTACAAC
GAGCTCGTCAACCAGTTCGACGCAGCGATGGCGGACATCATCGGTCGGTTCGCACCCGGCTTTGACGGGGCGTACCTCGA
CCAGAAGACCGATGCAAACGACACTGTCGGATTCGAAATCAATCTGGCGCGCGACGGCCACACAACCGATTTAGACACTC
TCAGCGAGGGGGAGCGCGAGCTGGTTGGGATCGTGACGGCGCTGGCGGGCTACCGAACGTTCAGTGTCGGCGACCGGGTT
CCGTGCATTCTTTTGGATGGTATCGGACAGCTCGCAGCGGAACACATTCGGCACATGATCGAGTATCTAGAGAACACGGC
CGAGATCCTGGTGACAACCGCGTATCCCGAAGCTGGATCGTTCGACGGTGAAACGGTGTCACCGGAACACTGGGATGTCA
TCTCACACGAGACAGCCCAGTCGAGAGACCACCCTCAAATCACGAATTAA

Upstream 100 bases:

>100_bases
CCCCGGTTATTGTTAGTACGCTATTGTTTCCGCGGCTCGGATCATCTAGTGAGTGTATAACATCGCTCCTTTTATTATCG
ATCTAACTAGAACTCAGAGT

Downstream 100 bases:

>100_bases
CAGCGACCGTTGCATTCGGTCGTGCACCATAGAGGCGGGTCGGACGTGTCCGAACGACTCGCTGTACATCGTCTGTCGGG
GGTGATCGACACTCTCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: SMC-Like; Chromosome Segregation ATPase-Like Protein; Chromosome Segregation Protein; Kinetochore-Ndc80 Subunit Spc; Homolog 1 ; Homolog 2

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MWNVDVTCIGGIRSGEATLRPGPNIVQASNFQGKSSFLAAIQTAIGTTGLLTEDHPLMENEDDGKVTLETDEETYTVSLT
RATDSDEPAISRSGTPYLTRDQDQIAARLFAVLGEDNPIRAAVREENQERLTELLKKPLETENIDLRIEALQREIKELED
EVAAAEAASADLPAAQQKVTRLQGELRDLNETRDELERKVDEETDQRALRDELTAKQSDLEREEARLERLENQVDRRKAQ
LDDKEAALESLDIPDSPTAEADIAEKQTRIDELAVKIDLLDDLHRSTKAIIDEGEIDLITDVERTLSGDTFSCFVCGAET
TAEAVTERLNEISDRQESLREQRATLTEEVTQMQQRTREIESKRQQKAELEDEIKRLRVDIQEDQHEVRSIEATIEELQA
EIEQREAEYEAAEKAGESHSAELKTIQQKIGSTETKLDRAQAELERIEAELQKRNDRQEQLETKRDELETLRQRRKQKYN
ELVNQFDAAMADIIGRFAPGFDGAYLDQKTDANDTVGFEINLARDGHTTDLDTLSEGERELVGIVTALAGYRTFSVGDRV
PCILLDGIGQLAAEHIRHMIEYLENTAEILVTTAYPEAGSFDGETVSPEHWDVISHETAQSRDHPQITN

Sequences:

>Translated_629_residues
MWNVDVTCIGGIRSGEATLRPGPNIVQASNFQGKSSFLAAIQTAIGTTGLLTEDHPLMENEDDGKVTLETDEETYTVSLT
RATDSDEPAISRSGTPYLTRDQDQIAARLFAVLGEDNPIRAAVREENQERLTELLKKPLETENIDLRIEALQREIKELED
EVAAAEAASADLPAAQQKVTRLQGELRDLNETRDELERKVDEETDQRALRDELTAKQSDLEREEARLERLENQVDRRKAQ
LDDKEAALESLDIPDSPTAEADIAEKQTRIDELAVKIDLLDDLHRSTKAIIDEGEIDLITDVERTLSGDTFSCFVCGAET
TAEAVTERLNEISDRQESLREQRATLTEEVTQMQQRTREIESKRQQKAELEDEIKRLRVDIQEDQHEVRSIEATIEELQA
EIEQREAEYEAAEKAGESHSAELKTIQQKIGSTETKLDRAQAELERIEAELQKRNDRQEQLETKRDELETLRQRRKQKYN
ELVNQFDAAMADIIGRFAPGFDGAYLDQKTDANDTVGFEINLARDGHTTDLDTLSEGERELVGIVTALAGYRTFSVGDRV
PCILLDGIGQLAAEHIRHMIEYLENTAEILVTTAYPEAGSFDGETVSPEHWDVISHETAQSRDHPQITN
>Mature_629_residues
MWNVDVTCIGGIRSGEATLRPGPNIVQASNFQGKSSFLAAIQTAIGTTGLLTEDHPLMENEDDGKVTLETDEETYTVSLT
RATDSDEPAISRSGTPYLTRDQDQIAARLFAVLGEDNPIRAAVREENQERLTELLKKPLETENIDLRIEALQREIKELED
EVAAAEAASADLPAAQQKVTRLQGELRDLNETRDELERKVDEETDQRALRDELTAKQSDLEREEARLERLENQVDRRKAQ
LDDKEAALESLDIPDSPTAEADIAEKQTRIDELAVKIDLLDDLHRSTKAIIDEGEIDLITDVERTLSGDTFSCFVCGAET
TAEAVTERLNEISDRQESLREQRATLTEEVTQMQQRTREIESKRQQKAELEDEIKRLRVDIQEDQHEVRSIEATIEELQA
EIEQREAEYEAAEKAGESHSAELKTIQQKIGSTETKLDRAQAELERIEAELQKRNDRQEQLETKRDELETLRQRRKQKYN
ELVNQFDAAMADIIGRFAPGFDGAYLDQKTDANDTVGFEINLARDGHTTDLDTLSEGERELVGIVTALAGYRTFSVGDRV
PCILLDGIGQLAAEHIRHMIEYLENTAEILVTTAYPEAGSFDGETVSPEHWDVISHETAQSRDHPQITN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70888; Mature: 70888

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNVDVTCIGGIRSGEATLRPGPNIVQASNFQGKSSFLAAIQTAIGTTGLLTEDHPLMEN
CCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
EDDGKVTLETDEETYTVSLTRATDSDEPAISRSGTPYLTRDQDQIAARLFAVLGEDNPIR
CCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
AAVREENQERLTELLKKPLETENIDLRIEALQREIKELEDEVAAAEAASADLPAAQQKVT
HHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RLQGELRDLNETRDELERKVDEETDQRALRDELTAKQSDLEREEARLERLENQVDRRKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDKEAALESLDIPDSPTAEADIAEKQTRIDELAVKIDLLDDLHRSTKAIIDEGEIDLIT
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
DVERTLSGDTFSCFVCGAETTAEAVTERLNEISDRQESLREQRATLTEEVTQMQQRTREI
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESKRQQKAELEDEIKRLRVDIQEDQHEVRSIEATIEELQAEIEQREAEYEAAEKAGESHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AELKTIQQKIGSTETKLDRAQAELERIEAELQKRNDRQEQLETKRDELETLRQRRKQKYN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELVNQFDAAMADIIGRFAPGFDGAYLDQKTDANDTVGFEINLARDGHTTDLDTLSEGERE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCHHH
LVGIVTALAGYRTFSVGDRVPCILLDGIGQLAAEHIRHMIEYLENTAEILVTTAYPEAGS
HHHHHHHHHCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCC
FDGETVSPEHWDVISHETAQSRDHPQITN
CCCCCCCCCCCCHHCCHHHCCCCCCCCCC
>Mature Secondary Structure
MWNVDVTCIGGIRSGEATLRPGPNIVQASNFQGKSSFLAAIQTAIGTTGLLTEDHPLMEN
CCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
EDDGKVTLETDEETYTVSLTRATDSDEPAISRSGTPYLTRDQDQIAARLFAVLGEDNPIR
CCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
AAVREENQERLTELLKKPLETENIDLRIEALQREIKELEDEVAAAEAASADLPAAQQKVT
HHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RLQGELRDLNETRDELERKVDEETDQRALRDELTAKQSDLEREEARLERLENQVDRRKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDDKEAALESLDIPDSPTAEADIAEKQTRIDELAVKIDLLDDLHRSTKAIIDEGEIDLIT
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
DVERTLSGDTFSCFVCGAETTAEAVTERLNEISDRQESLREQRATLTEEVTQMQQRTREI
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESKRQQKAELEDEIKRLRVDIQEDQHEVRSIEATIEELQAEIEQREAEYEAAEKAGESHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AELKTIQQKIGSTETKLDRAQAELERIEAELQKRNDRQEQLETKRDELETLRQRRKQKYN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELVNQFDAAMADIIGRFAPGFDGAYLDQKTDANDTVGFEINLARDGHTTDLDTLSEGERE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCHHH
LVGIVTALAGYRTFSVGDRVPCILLDGIGQLAAEHIRHMIEYLENTAEILVTTAYPEAGS
HHHHHHHHHCCCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCC
FDGETVSPEHWDVISHETAQSRDHPQITN
CCCCCCCCCCCCHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA