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The map label for this gene is arcA

Identifier: 16120225

GI number: 16120225

Start: 246927

End: 248387

Strand: Reverse

Name: arcA

Synonym: VNG6317G

Alternate gene names: NA

Gene position: 248387-246927 (Counterclockwise)

Preceding gene: 16120226

Following gene: 16120224

Centisome position: 67.97

GC content: 61.53

Gene sequence:

>1461_bases
ATGAGTAGTGAATCACCGGAGTCCGTAGATGACAGCACGAAGGTGCAGGCGACCGCCGAATGGGACCCGCTCCAAGCGGT
CCGGATGCACCTCCCGGGGGCCGAAACGTTCGTTGGCATCATGGACCCCGAGCCGAACCTGTTTCTGAACGACTTCTCGC
TTGTCGACGCCCAACAGGAGCATCTGAGTCTCAGCCAGGACCTGGAGGCGGCGCTTCCAGCATCGAACCCGATCCATTAT
CTCCACGACGATCTCGCCAACGGCAACGGCATGAACGCACTGCTCTCCTCGCGAGTCAACTTCGATCTCAGTGAACTCGG
AGAGGACGAGCAGGTCAACCGGCGCGACAAGATGTGGGCACGGCTGCACGAGCTCAGCCCACATACGCAGATCCAGGCCG
TGCTCGGGAACGCCGAGGTCATCCGGCACCACTCCCACTCCGACGAGGAGGTTCCTGGCTCGAACCCGGACCGCTGGGAC
ACGACGAGTGTGCAGTTGGAGCAGCCGCTCACGAACATGTACTTCCAGCGTGACCAGCAGTTCGTCACGCAAAACGGCGT
CGTGCTCTGCTCGATGAAAGAGGACACGCGCAAACCGGAGGTCGACATCGCTCGCGCGTCCTGGGAGGCCCTCGACGGGG
ACGAATTCGACGTCGACATCGTCGCCGACATGAGCCAGGTTCGGGAACACGACGTAACGGAGCACGTCCCCGAGCGCGAC
GACATCCAAGAGACGGAAGTGCTCGTTGAGGGCGGTGACTTCTATCCGGCTGGCGAGTTCTCGCTGCTCGGTGTCTCGGC
GAAGATTCCCGAAGGAGAGGCGTACCCGAAACACGACATCGCCGAGGATGACACCGAGTACGTCCATCGGACCACGTACG
CCGCAGGTCACCGACTCCTGATGGACGACGCCTTCGGATCCGAGGAAGTCGGCCTCGTTCGTGCGCCGTTCGAAGCCGCA
CAGGCCCACAAGGACGACGACAACGGGGAAGTCGAGATGGACATCATGCACCTCGACACGTGGTTCAACTTCGTCGACGA
CGATCTCGTTGTCGCCCACAAGGAACTCGTGGAGAACACGACGCTTGACGTGTACGCACGAACCCACGGCGGCGAGAAGC
CGTACACGCTGGAACGACCCGACGTGAACTTCGGGGAGTACCTGCGCGAGAAGGGCTTCGAAATCGTCGACGTGTACGAC
TACGTTGACCCGTCCCATCCGGACACCGACATGGCGTTGAAGGCCATCACGAACTTCCTGACGGTTGGGCCACGGAAGAT
CCTGCCAGTCCGCTTCTCCGACGACGACGACGGCGTGATGAAGCAGTTCATCGATGGGATCCAGGAGGACTACGATGTCA
CGGTCATTCCGGACGGAGAGGGGCGCAAGATCATCAACCTCCGTGCGGGCTACGGGGCGATCCACTGTATGACGACGCCG
CTTCGACGCACTCCGGAATAG

Upstream 100 bases:

>100_bases
GGTGAGGTTAGAGACAGCGTAGCCGCCGCGTGTCATAAACATCGGTATATTTTGGCGACGGCTTTATCAGGCTATATCCA
GAATACTCAACTGAATTCCC

Downstream 100 bases:

>100_bases
CGGTCGACGCGGGCATCGGGAGTAGGCACGTCCACCGCGGTTGGGCTCTTCTTTGACTGCGTGTGTCTGCGGTGTACCGG
GCACGTTCGTTCCGGCGGTG

Product: arginine deiminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSSESPESVDDSTKVQATAEWDPLQAVRMHLPGAETFVGIMDPEPNLFLNDFSLVDAQQEHLSLSQDLEAALPASNPIHY
LHDDLANGNGMNALLSSRVNFDLSELGEDEQVNRRDKMWARLHELSPHTQIQAVLGNAEVIRHHSHSDEEVPGSNPDRWD
TTSVQLEQPLTNMYFQRDQQFVTQNGVVLCSMKEDTRKPEVDIARASWEALDGDEFDVDIVADMSQVREHDVTEHVPERD
DIQETEVLVEGGDFYPAGEFSLLGVSAKIPEGEAYPKHDIAEDDTEYVHRTTYAAGHRLLMDDAFGSEEVGLVRAPFEAA
QAHKDDDNGEVEMDIMHLDTWFNFVDDDLVVAHKELVENTTLDVYARTHGGEKPYTLERPDVNFGEYLREKGFEIVDVYD
YVDPSHPDTDMALKAITNFLTVGPRKILPVRFSDDDDGVMKQFIDGIQEDYDVTVIPDGEGRKIINLRAGYGAIHCMTTP
LRRTPE

Sequences:

>Translated_486_residues
MSSESPESVDDSTKVQATAEWDPLQAVRMHLPGAETFVGIMDPEPNLFLNDFSLVDAQQEHLSLSQDLEAALPASNPIHY
LHDDLANGNGMNALLSSRVNFDLSELGEDEQVNRRDKMWARLHELSPHTQIQAVLGNAEVIRHHSHSDEEVPGSNPDRWD
TTSVQLEQPLTNMYFQRDQQFVTQNGVVLCSMKEDTRKPEVDIARASWEALDGDEFDVDIVADMSQVREHDVTEHVPERD
DIQETEVLVEGGDFYPAGEFSLLGVSAKIPEGEAYPKHDIAEDDTEYVHRTTYAAGHRLLMDDAFGSEEVGLVRAPFEAA
QAHKDDDNGEVEMDIMHLDTWFNFVDDDLVVAHKELVENTTLDVYARTHGGEKPYTLERPDVNFGEYLREKGFEIVDVYD
YVDPSHPDTDMALKAITNFLTVGPRKILPVRFSDDDDGVMKQFIDGIQEDYDVTVIPDGEGRKIINLRAGYGAIHCMTTP
LRRTPE
>Mature_485_residues
SSESPESVDDSTKVQATAEWDPLQAVRMHLPGAETFVGIMDPEPNLFLNDFSLVDAQQEHLSLSQDLEAALPASNPIHYL
HDDLANGNGMNALLSSRVNFDLSELGEDEQVNRRDKMWARLHELSPHTQIQAVLGNAEVIRHHSHSDEEVPGSNPDRWDT
TSVQLEQPLTNMYFQRDQQFVTQNGVVLCSMKEDTRKPEVDIARASWEALDGDEFDVDIVADMSQVREHDVTEHVPERDD
IQETEVLVEGGDFYPAGEFSLLGVSAKIPEGEAYPKHDIAEDDTEYVHRTTYAAGHRLLMDDAFGSEEVGLVRAPFEAAQ
AHKDDDNGEVEMDIMHLDTWFNFVDDDLVVAHKELVENTTLDVYARTHGGEKPYTLERPDVNFGEYLREKGFEIVDVYDY
VDPSHPDTDMALKAITNFLTVGPRKILPVRFSDDDDGVMKQFIDGIQEDYDVTVIPDGEGRKIINLRAGYGAIHCMTTPL
RRTPE

Specific function: Unknown

COG id: COG2235

COG function: function code E; Arginine deiminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54707; Mature: 54576

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSESPESVDDSTKVQATAEWDPLQAVRMHLPGAETFVGIMDPEPNLFLNDFSLVDAQQE
CCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHCCHHH
HLSLSQDLEAALPASNPIHYLHDDLANGNGMNALLSSRVNFDLSELGEDEQVNRRDKMWA
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHH
RLHELSPHTQIQAVLGNAEVIRHHSHSDEEVPGSNPDRWDTTSVQLEQPLTNMYFQRDQQ
HHHHCCCCCEEHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH
FVTQNGVVLCSMKEDTRKPEVDIARASWEALDGDEFDVDIVADMSQVREHDVTEHVPERD
HHHCCCEEEEEECCCCCCCCCEEECCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCC
DIQETEVLVEGGDFYPAGEFSLLGVSAKIPEGEAYPKHDIAEDDTEYVHRTTYAAGHRLL
CCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
MDDAFGSEEVGLVRAPFEAAQAHKDDDNGEVEMDIMHLDTWFNFVDDDLVVAHKELVENT
EECCCCCCCCCEEECCHHHHHCCCCCCCCEEEEEEEEEEHHHHHCCCCHHHHHHHHHCCC
TLDVYARTHGGEKPYTLERPDVNFGEYLREKGFEIVDVYDYVDPSHPDTDMALKAITNFL
CEEEEEECCCCCCCEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
TVGPRKILPVRFSDDDDGVMKQFIDGIQEDYDVTVIPDGEGRKIINLRAGYGAIHCMTTP
HCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEECC
LRRTPE
CCCCCC
>Mature Secondary Structure 
SSESPESVDDSTKVQATAEWDPLQAVRMHLPGAETFVGIMDPEPNLFLNDFSLVDAQQE
CCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHCCHHH
HLSLSQDLEAALPASNPIHYLHDDLANGNGMNALLSSRVNFDLSELGEDEQVNRRDKMWA
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHH
RLHELSPHTQIQAVLGNAEVIRHHSHSDEEVPGSNPDRWDTTSVQLEQPLTNMYFQRDQQ
HHHHCCCCCEEHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH
FVTQNGVVLCSMKEDTRKPEVDIARASWEALDGDEFDVDIVADMSQVREHDVTEHVPERD
HHHCCCEEEEEECCCCCCCCCEEECCCHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCC
DIQETEVLVEGGDFYPAGEFSLLGVSAKIPEGEAYPKHDIAEDDTEYVHRTTYAAGHRLL
CCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
MDDAFGSEEVGLVRAPFEAAQAHKDDDNGEVEMDIMHLDTWFNFVDDDLVVAHKELVENT
EECCCCCCCCCEEECCHHHHHCCCCCCCCEEEEEEEEEEHHHHHCCCCHHHHHHHHHCCC
TLDVYARTHGGEKPYTLERPDVNFGEYLREKGFEIVDVYDYVDPSHPDTDMALKAITNFL
CEEEEEECCCCCCCEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
TVGPRKILPVRFSDDDDGVMKQFIDGIQEDYDVTVIPDGEGRKIINLRAGYGAIHCMTTP
HCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEECC
LRRTPE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA