| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16120209
GI number: 16120209
Start: 227516
End: 228502
Strand: Reverse
Name: Not Available
Synonym: VNG6296C
Alternate gene names: NA
Gene position: 228502-227516 (Counterclockwise)
Preceding gene: 16120212
Following gene: 16120208
Centisome position: 62.53
GC content: 67.48
Gene sequence:
>987_bases ATGCGTAGGTGGGGTATGAAGCTCCGCCAGATTGCCGGGTCGCTGGCCGCGGCTACCGGTGTCGTTGCTGCCACGAACGC CGCCCTCGCGTGGCGGGCGGACGAGCTTGCGTCGCCACTAGACGGGACGAACAACACGTACCAGTGGCGTGGGTTCGACA TCGCGTACACCGAGGCCGGCGATCCGGACGATCAGGACGTGGTACTGCTGCATGGACTGAACGCTGCGGGATCGAGTTTC GAGTTCCGCAACGTGTTCGACGCGCTGGCCGCGGATCACCACGTGATCGCGCCCGACCTGCCGGGGTTCGGTCGCTCAGA CCGGCCGCCGATCGAGTACGCGGCGTCCCACTACACGACGTTCGTGGCCGACTTCCTCGCCGACGCCGCCGAGGATCCGA TGGTCGTGGCATCATCGCATTCGGGTGCGTACGCGACCGCTGCGGCCGCCGACACCGATTCGGTCAGCGAGCTGGTGTTG GTGTGTCCGACGACCGCGGGGTTCTCGGGGACGCGCCCGCTCGTCGGCGCGCTCGTCAGGGCGCCAGTGGTCGGCACGGC GCTGTTCAACGTGGCCACGAGCAAGCGCGCCATCCGATATTTCAACGCCGATCACGGCTACCACGACGAGTCGGTTGTCA CCGAGGACGTGGTCGAGTACCACTGGCGGACCGCCCATCAGCCGGGCGCTCGGTTCGCCGCCGCGTCGTTTTTCGCGGGC GCCCTGGATGTGGATATGGACTTGGGTGCCGAGCTGGCGGCTCTCGATCTGCCGGTGACAGTTGTTTGGGGCCAGGAAGC GACCATCTCGCCTGTCGCTGATGGCCGCGACATCGCCGATGCCGCGGGCGCGCGGCTGGTGGTGCTCGAAGAGTCCGACG TGCAGCCCCACGTCGAGCGCCCTGAGGCGTTCCTCCGGGACGCCGTGGAACCAAGCGCTACAGTTGAGGGCGGCGAGGAT GTCAAACACGCCACTGATGGAGCGTGA
Upstream 100 bases:
>100_bases GAGGGGCAGTCACAGCAACCAGAACGCACCGGGCAACGATCGAGTGCGCTCGCACCTGCGTGGCGACTGCGCTCGCGGCA ACAACTGATAAGCCTCCGGC
Downstream 100 bases:
>100_bases CGAAGCTGCGACTAGCGCGGAAACCAAGCAACCGGCGAAAAAGCGGCGGCCACGAGTAGTCGCTGTTTCGTCGTGAGGTC GTACGGAGCAAAGCGGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Domain-Containing Protein; Homolog Hydrolase; Alpha/Beta Fold Family Hydrolase; Haloalkane Dehalogenase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRRWGMKLRQIAGSLAAATGVVAATNAALAWRADELASPLDGTNNTYQWRGFDIAYTEAGDPDDQDVVLLHGLNAAGSSF EFRNVFDALAADHHVIAPDLPGFGRSDRPPIEYAASHYTTFVADFLADAAEDPMVVASSHSGAYATAAAADTDSVSELVL VCPTTAGFSGTRPLVGALVRAPVVGTALFNVATSKRAIRYFNADHGYHDESVVTEDVVEYHWRTAHQPGARFAAASFFAG ALDVDMDLGAELAALDLPVTVVWGQEATISPVADGRDIADAAGARLVVLEESDVQPHVERPEAFLRDAVEPSATVEGGED VKHATDGA
Sequences:
>Translated_328_residues MRRWGMKLRQIAGSLAAATGVVAATNAALAWRADELASPLDGTNNTYQWRGFDIAYTEAGDPDDQDVVLLHGLNAAGSSF EFRNVFDALAADHHVIAPDLPGFGRSDRPPIEYAASHYTTFVADFLADAAEDPMVVASSHSGAYATAAAADTDSVSELVL VCPTTAGFSGTRPLVGALVRAPVVGTALFNVATSKRAIRYFNADHGYHDESVVTEDVVEYHWRTAHQPGARFAAASFFAG ALDVDMDLGAELAALDLPVTVVWGQEATISPVADGRDIADAAGARLVVLEESDVQPHVERPEAFLRDAVEPSATVEGGED VKHATDGA >Mature_328_residues MRRWGMKLRQIAGSLAAATGVVAATNAALAWRADELASPLDGTNNTYQWRGFDIAYTEAGDPDDQDVVLLHGLNAAGSSF EFRNVFDALAADHHVIAPDLPGFGRSDRPPIEYAASHYTTFVADFLADAAEDPMVVASSHSGAYATAAAADTDSVSELVL VCPTTAGFSGTRPLVGALVRAPVVGTALFNVATSKRAIRYFNADHGYHDESVVTEDVVEYHWRTAHQPGARFAAASFFAG ALDVDMDLGAELAALDLPVTVVWGQEATISPVADGRDIADAAGARLVVLEESDVQPHVERPEAFLRDAVEPSATVEGGED VKHATDGA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34605; Mature: 34605
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWGMKLRQIAGSLAAATGVVAATNAALAWRADELASPLDGTNNTYQWRGFDIAYTEAG CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCCCCCCCCEEEECEEEEECCCC DPDDQDVVLLHGLNAAGSSFEFRNVFDALAADHHVIAPDLPGFGRSDRPPIEYAASHYTT CCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHH FVADFLADAAEDPMVVASSHSGAYATAAAADTDSVSELVLVCPTTAGFSGTRPLVGALVR HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH APVVGTALFNVATSKRAIRYFNADHGYHDESVVTEDVVEYHWRTAHQPGARFAAASFFAG HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC ALDVDMDLGAELAALDLPVTVVWGQEATISPVADGRDIADAAGARLVVLEESDVQPHVER CEEECCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCC PEAFLRDAVEPSATVEGGEDVKHATDGA HHHHHHHCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MRRWGMKLRQIAGSLAAATGVVAATNAALAWRADELASPLDGTNNTYQWRGFDIAYTEAG CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCCCCCCCCEEEECEEEEECCCC DPDDQDVVLLHGLNAAGSSFEFRNVFDALAADHHVIAPDLPGFGRSDRPPIEYAASHYTT CCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHH FVADFLADAAEDPMVVASSHSGAYATAAAADTDSVSELVLVCPTTAGFSGTRPLVGALVR HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH APVVGTALFNVATSKRAIRYFNADHGYHDESVVTEDVVEYHWRTAHQPGARFAAASFFAG HHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC ALDVDMDLGAELAALDLPVTVVWGQEATISPVADGRDIADAAGARLVVLEESDVQPHVER CEEECCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCC PEAFLRDAVEPSATVEGGEDVKHATDGA HHHHHHHCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA