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Identifier: 16120206

GI number: 16120206

Start: 222849

End: 223370

Strand: Reverse

Name: Not Available

Synonym: VNG6292C

Alternate gene names: NA

Gene position: 223370-222849 (Counterclockwise)

Preceding gene: 16120208

Following gene: 16120205

Centisome position: 61.13

GC content: 52.68

Gene sequence:

>522_bases
ATGCGAAACCAAGAACTGCTCACAGAGACGTTGAACACAGCGAATCTTGAATGTTGGGAGCGAGAGCGGACGGCGAAGCC
GTCAAGGGTCGCAGTTGACGAGACCGCTATCAAAATCAACGGCGAATGGTCTTGGCTGTACGCTGCAATAGACCTCGACA
CAAAATTGATTCTTGACGTGGAATTGTTTGGACGGCATGGGACTGATCCAGCGGCTGCATTTCTTCATGGACTCCGTGAG
AAACACGATCTCTCCGACGCTGTGTTTCTCGTTGACCAGTTCGGCTACCGGACTGCCCTCTCCCGCTTAGGGCTCAACGG
TCGGGTTGACTATATCGACAGAAACCTCATCGAAAAGTGGTTTCACACCTTCAAAATGCGTATCGCCCGTTTCCATAACT
CCTGGGTCGGCAGTCGGGCGAGCGCACGCGAATGGATTGAACAATTCGTACATTACTACAACCGCCAACGACCGCATCAA
CCACTCGACGAACGAACGCCAGCTGAAGCCGTGCTTAACTAG

Upstream 100 bases:

>100_bases
TGGTAATTGGGCTGAGAGTTGGGGGTCGTGTAGGTGTCTTAGTTGGCACTGTCTAGTTAAGCCAGTTTGAGAAGTGAGCA
GTTCGTTGGTTTTGGTGTCT

Downstream 100 bases:

>100_bases
ACAGTGCCCTGAGGAAGAAGTAATCAGAGTTCTGCACTACTGCGATTCTGCTCCGCTTAATGATGACATTGACCGGCTTC
TAAGAGCGTGTATGGATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Transposase And Inactivated Derivatives-Like Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRNQELLTETLNTANLECWERERTAKPSRVAVDETAIKINGEWSWLYAAIDLDTKLILDVELFGRHGTDPAAAFLHGLRE
KHDLSDAVFLVDQFGYRTALSRLGLNGRVDYIDRNLIEKWFHTFKMRIARFHNSWVGSRASAREWIEQFVHYYNRQRPHQ
PLDERTPAEAVLN

Sequences:

>Translated_173_residues
MRNQELLTETLNTANLECWERERTAKPSRVAVDETAIKINGEWSWLYAAIDLDTKLILDVELFGRHGTDPAAAFLHGLRE
KHDLSDAVFLVDQFGYRTALSRLGLNGRVDYIDRNLIEKWFHTFKMRIARFHNSWVGSRASAREWIEQFVHYYNRQRPHQ
PLDERTPAEAVLN
>Mature_173_residues
MRNQELLTETLNTANLECWERERTAKPSRVAVDETAIKINGEWSWLYAAIDLDTKLILDVELFGRHGTDPAAAFLHGLRE
KHDLSDAVFLVDQFGYRTALSRLGLNGRVDYIDRNLIEKWFHTFKMRIARFHNSWVGSRASAREWIEQFVHYYNRQRPHQ
PLDERTPAEAVLN

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20267; Mature: 20267

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQELLTETLNTANLECWERERTAKPSRVAVDETAIKINGEWSWLYAAIDLDTKLILDV
CCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEEEECCCEEEEEEEEECCCEEEEEE
ELFGRHGTDPAAAFLHGLREKHDLSDAVFLVDQFGYRTALSRLGLNGRVDYIDRNLIEKW
EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FHTFKMRIARFHNSWVGSRASAREWIEQFVHYYNRQRPHQPLDERTPAEAVLN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MRNQELLTETLNTANLECWERERTAKPSRVAVDETAIKINGEWSWLYAAIDLDTKLILDV
CCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEEEECCCEEEEEEEEECCCEEEEEE
ELFGRHGTDPAAAFLHGLREKHDLSDAVFLVDQFGYRTALSRLGLNGRVDYIDRNLIEKW
EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FHTFKMRIARFHNSWVGSRASAREWIEQFVHYYNRQRPHQPLDERTPAEAVLN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA