Click here to switch to the map view.

The map label for this gene is orc5

Identifier: 16120192

GI number: 16120192

Start: 210588

End: 212033

Strand: Reverse

Name: orc5

Synonym: VNG6272G

Alternate gene names: 16120192

Gene position: 212033-210588 (Counterclockwise)

Preceding gene: 16120193

Following gene: 16120188

Centisome position: 58.02

GC content: 61.48

Gene sequence:

>1446_bases
ATGGCTGGTCGCGACCAAGGTGGGACGCACGGAGTCGGCGACGACGCCGGGGTGGGCGGCGATGACGCGGCCGCCGATGG
CTCCGGGCATGGCGCTGGTAGCCAACTCGCTGGCTCGGACGCGGCCACAGACGAGGACGCACAGCGGTCGATCCGTGACA
TGCTTCACGACGACGGGGACGCGTCGGTGTTCGTCAACCGTGACCTCGTGGAGCCGGACACGATCATCGACGAGGAGCGA
ATCGTCGGCCGCGACGAACAACTGGAGTCGGTGGTGTCGTTTCTGAAGCCAACGCTGCAAGGGAATCGGCCACCGAACAT
GCTCCTGTACGGGCCCGCGGGAACCGGGAAGTCGCTCATTATCGGTGCGGTCACCCAACAGATCATCGAACTGTGCCACT
CCAAGGGTGAGCGGTTCGGCGTTGTGCAGGTCAACTGCCAGCCGATCAACACGCTCGACCAAGCCGTGTACGAACTCGTC
CAGACGGTCGCCAGCGATGTCGGCATCGAACCCGGAGTTCCCGAAACCGGAGTGTCGACGAAACGGAAGTACAGACGGCT
CTACGACCTCATCAACGAGCATTACGACTCGGTCATCTTCATTCTGGACGAGATCGATCTGCTGGTTGGTCGGCGCGCAA
ACGACGAGCCGGCGTACTCCAAACTGCTGTATCAACTCTCGCGCGCTAGCAACACGAACGACATCGAAGGCCAAGTGTCG
GTGGCCGCACTGACAAACGACCCCAAGTTCATGGAGAACATCGACGGGCGGGCCGAGAGCTCGTTCAATCCCCGCGATAT
TTACTTCCCGGATTACGACGCCACACAGCTCCGGCAGATCCTCGAAAACAGGCGTGACGCGTTCCGCCAAGACGCGTTGA
CCGACGACGTACTCCCGCTCGTGTCGGCGTTTGCGGCACAAAGCCATGGTGATGCTCGGAAAGCGATCGATCTGTTCCGT
GGAGCCGGCGATCTGGCCGACGAACAGGGGGATCAAACGGTCCGCGAAGACCACGTCCGGGAGTCCCAAGACGAGATCGA
CAAGGACCGGTCGCTGAAGTTGATCGCGGGGCTGACGACCCAGAAGAAGATTTCCCTGTACGCGACGGCGGCTGTCGCGC
ACTGTTCGAGTGCAACGCGGAACTCGGTGCCCAGTCCGGTTGGGTTCCAGGTGTACCAGTGGGTCACCGAGGAGATCGAT
GCCGACCAGATGACCCGGGAGACGTACGTGAAATACGTCAAGGAGTTGTCGACGTATGGATTGGTGTCGACGGCCCGAAA
GAGCCGTGGACGCGGTGGCGGAATGTATATGGACTTCACCTTCAGGGGTGATCCGGAGTCGATGATGCATCGGGTTGTCG
ACGACACGCGACTGGAGAGAGTCGGCACCGAATCCGAGCGGCTCCACGCGGTGGTGAACGCCCAACTTCGAGAGTTCGAG
GAGTAG

Upstream 100 bases:

>100_bases
GAGAGTGACATGGCCGAATTTGGGGCACAGATCCCGTATCACACCAGGATAAACATCGATTGGGGTTACGCTTTTCAACC
AGGGGGTGTACAGCATACGT

Downstream 100 bases:

>100_bases
TTGCCAGGCGATTCCCTGCTGCCTTTCGCTTCCCTCCCCACCCCCCGTCTTCGATGTGTAATCTCCTGTCGTGTCTCTGA
TCAGATCGTCGGCTCCTGCT

Product: orc / cell division control protein 6

Products: NA

Alternate protein names: CDC6 homolog 5 [H]

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAGRDQGGTHGVGDDAGVGGDDAAADGSGHGAGSQLAGSDAATDEDAQRSIRDMLHDDGDASVFVNRDLVEPDTIIDEER
IVGRDEQLESVVSFLKPTLQGNRPPNMLLYGPAGTGKSLIIGAVTQQIIELCHSKGERFGVVQVNCQPINTLDQAVYELV
QTVASDVGIEPGVPETGVSTKRKYRRLYDLINEHYDSVIFILDEIDLLVGRRANDEPAYSKLLYQLSRASNTNDIEGQVS
VAALTNDPKFMENIDGRAESSFNPRDIYFPDYDATQLRQILENRRDAFRQDALTDDVLPLVSAFAAQSHGDARKAIDLFR
GAGDLADEQGDQTVREDHVRESQDEIDKDRSLKLIAGLTTQKKISLYATAAVAHCSSATRNSVPSPVGFQVYQWVTEEID
ADQMTRETYVKYVKELSTYGLVSTARKSRGRGGGMYMDFTFRGDPESMMHRVVDDTRLERVGTESERLHAVVNAQLREFE
E

Sequences:

>Translated_481_residues
MAGRDQGGTHGVGDDAGVGGDDAAADGSGHGAGSQLAGSDAATDEDAQRSIRDMLHDDGDASVFVNRDLVEPDTIIDEER
IVGRDEQLESVVSFLKPTLQGNRPPNMLLYGPAGTGKSLIIGAVTQQIIELCHSKGERFGVVQVNCQPINTLDQAVYELV
QTVASDVGIEPGVPETGVSTKRKYRRLYDLINEHYDSVIFILDEIDLLVGRRANDEPAYSKLLYQLSRASNTNDIEGQVS
VAALTNDPKFMENIDGRAESSFNPRDIYFPDYDATQLRQILENRRDAFRQDALTDDVLPLVSAFAAQSHGDARKAIDLFR
GAGDLADEQGDQTVREDHVRESQDEIDKDRSLKLIAGLTTQKKISLYATAAVAHCSSATRNSVPSPVGFQVYQWVTEEID
ADQMTRETYVKYVKELSTYGLVSTARKSRGRGGGMYMDFTFRGDPESMMHRVVDDTRLERVGTESERLHAVVNAQLREFE
E
>Mature_480_residues
AGRDQGGTHGVGDDAGVGGDDAAADGSGHGAGSQLAGSDAATDEDAQRSIRDMLHDDGDASVFVNRDLVEPDTIIDEERI
VGRDEQLESVVSFLKPTLQGNRPPNMLLYGPAGTGKSLIIGAVTQQIIELCHSKGERFGVVQVNCQPINTLDQAVYELVQ
TVASDVGIEPGVPETGVSTKRKYRRLYDLINEHYDSVIFILDEIDLLVGRRANDEPAYSKLLYQLSRASNTNDIEGQVSV
AALTNDPKFMENIDGRAESSFNPRDIYFPDYDATQLRQILENRRDAFRQDALTDDVLPLVSAFAAQSHGDARKAIDLFRG
AGDLADEQGDQTVREDHVRESQDEIDKDRSLKLIAGLTTQKKISLYATAAVAHCSSATRNSVPSPVGFQVYQWVTEEIDA
DQMTRETYVKYVKELSTYGLVSTARKSRGRGGGMYMDFTFRGDPESMMHRVVDDTRLERVGTESERLHAVVNAQLREFEE

Specific function: Might be involved in the initiation of DNA replication [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDC6/cdc18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR015163
- InterPro:   IPR014277
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00004 AAA; PF09079 Cdc6_C [H]

EC number: NA

Molecular weight: Translated: 52914; Mature: 52783

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRDQGGTHGVGDDAGVGGDDAAADGSGHGAGSQLAGSDAATDEDAQRSIRDMLHDDGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
ASVFVNRDLVEPDTIIDEERIVGRDEQLESVVSFLKPTLQGNRPPNMLLYGPAGTGKSLI
CEEEEECCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHH
IGAVTQQIIELCHSKGERFGVVQVNCQPINTLDQAVYELVQTVASDVGIEPGVPETGVST
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
KRKYRRLYDLINEHYDSVIFILDEIDLLVGRRANDEPAYSKLLYQLSRASNTNDIEGQVS
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEE
VAALTNDPKFMENIDGRAESSFNPRDIYFPDYDATQLRQILENRRDAFRQDALTDDVLPL
EEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
VSAFAAQSHGDARKAIDLFRGAGDLADEQGDQTVREDHVRESQDEIDKDRSLKLIAGLTT
HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
QKKISLYATAAVAHCSSATRNSVPSPVGFQVYQWVTEEIDADQMTRETYVKYVKELSTYG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LVSTARKSRGRGGGMYMDFTFRGDPESMMHRVVDDTRLERVGTESERLHAVVNAQLREFE
HHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
AGRDQGGTHGVGDDAGVGGDDAAADGSGHGAGSQLAGSDAATDEDAQRSIRDMLHDDGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
ASVFVNRDLVEPDTIIDEERIVGRDEQLESVVSFLKPTLQGNRPPNMLLYGPAGTGKSLI
CEEEEECCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHH
IGAVTQQIIELCHSKGERFGVVQVNCQPINTLDQAVYELVQTVASDVGIEPGVPETGVST
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
KRKYRRLYDLINEHYDSVIFILDEIDLLVGRRANDEPAYSKLLYQLSRASNTNDIEGQVS
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEE
VAALTNDPKFMENIDGRAESSFNPRDIYFPDYDATQLRQILENRRDAFRQDALTDDVLPL
EEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
VSAFAAQSHGDARKAIDLFRGAGDLADEQGDQTVREDHVRESQDEIDKDRSLKLIAGLTT
HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
QKKISLYATAAVAHCSSATRNSVPSPVGFQVYQWVTEEIDADQMTRETYVKYVKELSTYG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LVSTARKSRGRGGGMYMDFTFRGDPESMMHRVVDDTRLERVGTESERLHAVVNAQLREFE
HHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11016950 [H]