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The map label for this gene is gvpA2

Identifier: 16120172

GI number: 16120172

Start: 191862

End: 192101

Strand: Direct

Name: gvpA2

Synonym: VNG6241G

Alternate gene names: 16120172

Gene position: 191862-192101 (Clockwise)

Preceding gene: 16120162

Following gene: 16120173

Centisome position: 52.5

GC content: 63.33

Gene sequence:

>240_bases
ATGGCGCAACCAGACTCCTCAAGCTTGGCGGAGGTTCTCGACCGTGTACTGGACAAAGGCGTTGTCGTCGACGTGTGGGC
TCGCATCTCGCTTGTCGGGATCGAGATCCTGACCGTCGAGGCCCGCGTCGTGGCCGCATCGGTCGACACGTTCCTCCACT
ACGCCGAGGAAATCGCGAAAATCGAACAGGCAGAACTCACTGCGGGTGCCGAGGCCCCCGAACCGGCACCCGAGGCGTAG

Upstream 100 bases:

>100_bases
AATCAGCGAACTATTACGAGCGCCGAAACGGGGGTTGAACTCACAACGGCGGTTTTCCGGACACTCCCTGTAGTTGCGGG
TGGGTACCACCCAGATCACT

Downstream 100 bases:

>100_bases
CGAGAGCACTCCGGTGAGCAACCAGGGAGATGCATCGAACACAACCACACCACGCCGCTTTCTTAGCCCCATTCCACCCA
GACAATGACGGTTACAGACC

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: GVP; C-VAC

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MAQPDSSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFLHYAEEIAKIEQAELTAGAEAPEPAPEA

Sequences:

>Translated_79_residues
MAQPDSSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFLHYAEEIAKIEQAELTAGAEAPEPAPEA
>Mature_78_residues
AQPDSSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFLHYAEEIAKIEQAELTAGAEAPEPAPEA

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPA2_HALSA (P08959)

Other databases:

- EMBL:   X12862
- EMBL:   X16527
- EMBL:   X94688
- EMBL:   AE004438
- PIR:   S01422
- RefSeq:   NP_395760.1
- GeneID:   1449143
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6241G
- NMPDR:   fig|64091.1.peg.2444
- HOGENOM:   HBG695314
- OMA:   IDAWARV
- ProtClustDB:   PRK09371
- BioCyc:   HSP64091:VNG6241G-MONOMER
- GO:   GO:0005773
- HAMAP:   MF_00576
- InterPro:   IPR000638
- InterPro:   IPR018493

Pfam domain/function: PF00741 Gas_vesicle

EC number: NA

Molecular weight: Translated: 8373; Mature: 8241

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: PS00234 GAS_VESICLE_A_1; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPDSSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFLHYAEEIAK
CCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHH
IEQAELTAGAEAPEPAPEA
HHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AQPDSSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFLHYAEEIAK
CCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHH
IEQAELTAGAEAPEPAPEA
HHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3185512; 2586485; 8763925; 11016950