Click here to switch to the map view.

The map label for this gene is gvpL2

Identifier: 16120163

GI number: 16120163

Start: 186310

End: 186870

Strand: Reverse

Name: gvpL2

Synonym: VNG6229G

Alternate gene names: 16120163

Gene position: 186870-186310 (Counterclockwise)

Preceding gene: 16120164

Following gene: 16120160

Centisome position: 51.14

GC content: 67.74

Gene sequence:

>561_bases
ATGCGGTTCGACACCGTCTTCGCCGGCGGCGACAGTGCGCTCACCGACTGGCTTGCTGACACGCATCCCCGTCTCCGCAC
TGAACTGGACGGGTTTGCCGGCTGCTGGGAGTATCGCGTCACCCTGCTGTGGGACCCACAGCCCTTCGAGGCGCACGTAA
CCGCCACCGACGACACGCTCCAGGCTCTCGAAGCGCGCCAGGCCGAGGCTGACGCAGGCACGACGTTCCTGCTCGAAAAG
CAGTACGACGCCCGGCTGGCGGAGCGCCGCCGGGCACGTCGGTCGGCGCTCGCCAGTGACCTGTCCGCAGCCGTCGAACC
GGTCGCCACCCAGGTGGCGTCCCAAGACACCACAACGTCTCTGCGGGACGAGTCGGTATCCGAGCGTCATACGCCGATCG
CGCGACTCGCCGTGCTCGCGCCCGAAACCGACGAATCCGCGCTGGGATCGCAACTGGACGACATCGCCGCACGCGACGGC
GTGACGATCCGATTCACCGGCCCCTGGCCGCCGTACACGTTCGCGCCCGACATCTGTACCGATGAACCCAACCAAGCGTA
A

Upstream 100 bases:

>100_bases
GGTGTACGACGCCGACGACATCGATCAGGTGAAGCGGTGGCTGGTCACCCACCAGCAGGTCGTCGACGATGTCAGTGACG
TGTTCGGCACGCCACTCCCG

Downstream 100 bases:

>100_bases
CTCCCACGCCATCGTTGAATTCGTCGACGTACTGTTGCGCGACGGGGCCGTGATCCAGGCGGACGCGATCGTCACGGTTG
CCGGCGTCCCCCTGCTCGGG

Product: GvpL protein, cluster B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRFDTVFAGGDSALTDWLADTHPRLRTELDGFAGCWEYRVTLLWDPQPFEAHVTATDDTLQALEARQAEADAGTTFLLEK
QYDARLAERRRARRSALASDLSAAVEPVATQVASQDTTTSLRDESVSERHTPIARLAVLAPETDESALGSQLDDIAARDG
VTIRFTGPWPPYTFAPDICTDEPNQA

Sequences:

>Translated_186_residues
MRFDTVFAGGDSALTDWLADTHPRLRTELDGFAGCWEYRVTLLWDPQPFEAHVTATDDTLQALEARQAEADAGTTFLLEK
QYDARLAERRRARRSALASDLSAAVEPVATQVASQDTTTSLRDESVSERHTPIARLAVLAPETDESALGSQLDDIAARDG
VTIRFTGPWPPYTFAPDICTDEPNQA
>Mature_186_residues
MRFDTVFAGGDSALTDWLADTHPRLRTELDGFAGCWEYRVTLLWDPQPFEAHVTATDDTLQALEARQAEADAGTTFLLEK
QYDARLAERRRARRSALASDLSAAVEPVATQVASQDTTTSLRDESVSERHTPIARLAVLAPETDESALGSQLDDIAARDG
VTIRFTGPWPPYTFAPDICTDEPNQA

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPL2_HALSA (Q9HHU0)

Other databases:

- EMBL:   X64730
- EMBL:   X94688
- EMBL:   AE004438
- RefSeq:   NP_395751.1
- GeneID:   1449134
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6229G
- HOGENOM:   HBG498601
- BioCyc:   HSP64091:VNG6229G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR009430

Pfam domain/function: PF06386 GvpL_GvpF

EC number: NA

Molecular weight: Translated: 20453; Mature: 20453

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDTVFAGGDSALTDWLADTHPRLRTELDGFAGCWEYRVTLLWDPQPFEAHVTATDDTL
CCCCEEEECCCHHHHHHHHCCCCHHHHHHCHHHCEEEEEEEEEECCCCCEEEEEECHHHH
QALEARQAEADAGTTFLLEKQYDARLAERRRARRSALASDLSAAVEPVATQVASQDTTTS
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LRDESVSERHTPIARLAVLAPETDESALGSQLDDIAARDGVTIRFTGPWPPYTFAPDICT
HHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
DEPNQA
CCCCCC
>Mature Secondary Structure
MRFDTVFAGGDSALTDWLADTHPRLRTELDGFAGCWEYRVTLLWDPQPFEAHVTATDDTL
CCCCEEEECCCHHHHHHHHCCCCHHHHHHCHHHCEEEEEEEEEECCCCCEEEEEECHHHH
QALEARQAEADAGTTFLLEKQYDARLAERRRARRSALASDLSAAVEPVATQVASQDTTTS
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LRDESVSERHTPIARLAVLAPETDESALGSQLDDIAARDGVTIRFTGPWPPYTFAPDICT
HHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
DEPNQA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1404376; 8763925; 11016950