Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120161

GI number: 16120161

Start: 184711

End: 185703

Strand: Direct

Name: Not Available

Synonym: VNG6225C

Alternate gene names: NA

Gene position: 184711-185703 (Clockwise)

Preceding gene: 16120159

Following gene: 16120162

Centisome position: 50.55

GC content: 63.65

Gene sequence:

>993_bases
ATGATCACGGCGGTTGTCTACGCCGAGTCCGGAGGAACGTTCAAAACCACGATGACCGCGAACCTCGCGGTCGCGCTCAG
CCGAATGGACCTCGATGTGCTGGTGCTTGACCTCGACCCGCAGACTGGCAACCTCACGTCACTGTTCGACGTGGGTGAGG
ACCGCAGCGATCCGAACGCGGACAACCTTGTCAAGCACATCCTCGAGATGCCGGACGGCGACTTCGCATCGCTCATCGAG
ACGTCCCCAGAGGGCGTCGACATCGTGCCGAGCCACGACATGCTGAGTGACTTCACGTCCAACCTCGAACAGAAGATCAC
GTACGAGACCGGCGTGAAAGACGTGTCCCGCGAGGAGTACCCGCGCTACGAGCTGCTGTACCGGCTGCTGTGGGAGCGCG
AACAGGTGAACGAGCAGTACGACGTGGTGCTCATCGACCCCAACGCACGCGCCGAAGACCTCCTGTACAACGCGATGTAC
GCGCTTCGCACGCTCGTCGCGCCGGTCAAACCGGCTGGCAAGGGCAGCCTCAGCCTGGACGGCCTCGAAGAGATGGTCGG
GAACATGGAGACCGAACTCGACATCGGCGTCGGCTTGTCGTGTGTGGTCCCCTGTGGGGTGGGGCAGACGAACGCCCACA
AGCAGTACCGCGACCGGTTCGAGACCACGGACGCGTTCGCGACACCGGTCTCGATCGGCTCCCGAGAGAGCCTGATGGAC
GCCATGTGGGAGGCCCACGGATCTGCGTTCAAAGTCATCGAGGAGCGCTGGAAGACCTACGAGGGCGACGACGGGATGGT
GAGCGAGCGCGGAAAGCGACGGGTGCCTGACCGCGAACTCGAAACCCTGGAGACGATTTGGCGACTCGCCGGGTTCATCG
CCACCGACACCTTCGACGCCACGGTCCCCGAAGAGTTGGTCCTGGACATCGTTGACGACGGGACCGAGACCCTGCAGATG
GCGGGCAACGGACACCCGGAGGTGGCCGACTGA

Upstream 100 bases:

>100_bases
CAGATTTCTGTTACAGATAGTCGTTACAGATATCTGTTCCAGAAAACTGTCAAGACAGTCTGACACAGATATATGTAACC
GGGTGCTCGTAGGGACACAC

Downstream 100 bases:

>100_bases
TGGGGAACTCGTTCAAGCAGGGCGCTGGCGACCTGGACTTCGGCGGCGACAGCACCGCCGACGAGGACGAAGCCGACGAC
GCGACGGAATCCGGTCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: ParA Domain-Containing Protein; Cobyrinic Acid Ac-Diamide Synthase; Plasmid Partitioning Protein Soj; Spo0A Activation Inhibitor; Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning; ParA/MinD-Like Regulator

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNADNLVKHILEMPDGDFASLIE
TSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEYPRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMY
ALRTLVAPVKPAGKGSLSLDGLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD
AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDATVPEELVLDIVDDGTETLQM
AGNGHPEVAD

Sequences:

>Translated_330_residues
MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNADNLVKHILEMPDGDFASLIE
TSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEYPRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMY
ALRTLVAPVKPAGKGSLSLDGLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD
AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDATVPEELVLDIVDDGTETLQM
AGNGHPEVAD
>Mature_330_residues
MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNADNLVKHILEMPDGDFASLIE
TSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEYPRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMY
ALRTLVAPVKPAGKGSLSLDGLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD
AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDATVPEELVLDIVDDGTETLQM
AGNGHPEVAD

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36584; Mature: 36584

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNA
CEEEEEEECCCCEEEEEEHHHHHHHHHHCCEEEEEEEECCCCCCCHHHEECCCCCCCCCH
DNLVKHILEMPDGDFASLIETSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEY
HHHHHHHHHCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
PRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMYALRTLVAPVKPAGKGSLSLD
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
GLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD
HHHHHHCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHH
AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDA
HHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
TVPEELVLDIVDDGTETLQMAGNGHPEVAD
CCCHHHHHHHHCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNA
CEEEEEEECCCCEEEEEEHHHHHHHHHHCCEEEEEEEECCCCCCCHHHEECCCCCCCCCH
DNLVKHILEMPDGDFASLIETSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEY
HHHHHHHHHCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
PRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMYALRTLVAPVKPAGKGSLSLD
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
GLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD
HHHHHHCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHH
AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDA
HHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
TVPEELVLDIVDDGTETLQMAGNGHPEVAD
CCCHHHHHHHHCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA