| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120161
GI number: 16120161
Start: 184711
End: 185703
Strand: Direct
Name: Not Available
Synonym: VNG6225C
Alternate gene names: NA
Gene position: 184711-185703 (Clockwise)
Preceding gene: 16120159
Following gene: 16120162
Centisome position: 50.55
GC content: 63.65
Gene sequence:
>993_bases ATGATCACGGCGGTTGTCTACGCCGAGTCCGGAGGAACGTTCAAAACCACGATGACCGCGAACCTCGCGGTCGCGCTCAG CCGAATGGACCTCGATGTGCTGGTGCTTGACCTCGACCCGCAGACTGGCAACCTCACGTCACTGTTCGACGTGGGTGAGG ACCGCAGCGATCCGAACGCGGACAACCTTGTCAAGCACATCCTCGAGATGCCGGACGGCGACTTCGCATCGCTCATCGAG ACGTCCCCAGAGGGCGTCGACATCGTGCCGAGCCACGACATGCTGAGTGACTTCACGTCCAACCTCGAACAGAAGATCAC GTACGAGACCGGCGTGAAAGACGTGTCCCGCGAGGAGTACCCGCGCTACGAGCTGCTGTACCGGCTGCTGTGGGAGCGCG AACAGGTGAACGAGCAGTACGACGTGGTGCTCATCGACCCCAACGCACGCGCCGAAGACCTCCTGTACAACGCGATGTAC GCGCTTCGCACGCTCGTCGCGCCGGTCAAACCGGCTGGCAAGGGCAGCCTCAGCCTGGACGGCCTCGAAGAGATGGTCGG GAACATGGAGACCGAACTCGACATCGGCGTCGGCTTGTCGTGTGTGGTCCCCTGTGGGGTGGGGCAGACGAACGCCCACA AGCAGTACCGCGACCGGTTCGAGACCACGGACGCGTTCGCGACACCGGTCTCGATCGGCTCCCGAGAGAGCCTGATGGAC GCCATGTGGGAGGCCCACGGATCTGCGTTCAAAGTCATCGAGGAGCGCTGGAAGACCTACGAGGGCGACGACGGGATGGT GAGCGAGCGCGGAAAGCGACGGGTGCCTGACCGCGAACTCGAAACCCTGGAGACGATTTGGCGACTCGCCGGGTTCATCG CCACCGACACCTTCGACGCCACGGTCCCCGAAGAGTTGGTCCTGGACATCGTTGACGACGGGACCGAGACCCTGCAGATG GCGGGCAACGGACACCCGGAGGTGGCCGACTGA
Upstream 100 bases:
>100_bases CAGATTTCTGTTACAGATAGTCGTTACAGATATCTGTTCCAGAAAACTGTCAAGACAGTCTGACACAGATATATGTAACC GGGTGCTCGTAGGGACACAC
Downstream 100 bases:
>100_bases TGGGGAACTCGTTCAAGCAGGGCGCTGGCGACCTGGACTTCGGCGGCGACAGCACCGCCGACGAGGACGAAGCCGACGAC GCGACGGAATCCGGTCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: ParA Domain-Containing Protein; Cobyrinic Acid Ac-Diamide Synthase; Plasmid Partitioning Protein Soj; Spo0A Activation Inhibitor; Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning; ParA/MinD-Like Regulator
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNADNLVKHILEMPDGDFASLIE TSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEYPRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMY ALRTLVAPVKPAGKGSLSLDGLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDATVPEELVLDIVDDGTETLQM AGNGHPEVAD
Sequences:
>Translated_330_residues MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNADNLVKHILEMPDGDFASLIE TSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEYPRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMY ALRTLVAPVKPAGKGSLSLDGLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDATVPEELVLDIVDDGTETLQM AGNGHPEVAD >Mature_330_residues MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNADNLVKHILEMPDGDFASLIE TSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEYPRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMY ALRTLVAPVKPAGKGSLSLDGLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDATVPEELVLDIVDDGTETLQM AGNGHPEVAD
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36584; Mature: 36584
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNA CEEEEEEECCCCEEEEEEHHHHHHHHHHCCEEEEEEEECCCCCCCHHHEECCCCCCCCCH DNLVKHILEMPDGDFASLIETSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEY HHHHHHHHHCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHC PRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMYALRTLVAPVKPAGKGSLSLD CHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH GLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD HHHHHHCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHH AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDA HHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC TVPEELVLDIVDDGTETLQMAGNGHPEVAD CCCHHHHHHHHCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MITAVVYAESGGTFKTTMTANLAVALSRMDLDVLVLDLDPQTGNLTSLFDVGEDRSDPNA CEEEEEEECCCCEEEEEEHHHHHHHHHHCCEEEEEEEECCCCCCCHHHEECCCCCCCCCH DNLVKHILEMPDGDFASLIETSPEGVDIVPSHDMLSDFTSNLEQKITYETGVKDVSREEY HHHHHHHHHCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHC PRYELLYRLLWEREQVNEQYDVVLIDPNARAEDLLYNAMYALRTLVAPVKPAGKGSLSLD CHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH GLEEMVGNMETELDIGVGLSCVVPCGVGQTNAHKQYRDRFETTDAFATPVSIGSRESLMD HHHHHHCCCCCCEECCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHHH AMWEAHGSAFKVIEERWKTYEGDDGMVSERGKRRVPDRELETLETIWRLAGFIATDTFDA HHHHHCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC TVPEELVLDIVDDGTETLQMAGNGHPEVAD CCCHHHHHHHHCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA