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Identifier: 16120147

GI number: 16120147

Start: 169450

End: 170319

Strand: Direct

Name: Not Available

Synonym: VNG6208C

Alternate gene names: NA

Gene position: 169450-170319 (Clockwise)

Preceding gene: 16120146

Following gene: 16120148

Centisome position: 46.37

GC content: 61.15

Gene sequence:

>870_bases
ATGAAATCGTTACAACTCAAAGTCGGCGCAGTGGTCGGTGCATTCGTTTTGGTGACCGTGCTCGTTGGCGGTGGACTGGC
GTGGAATCCAGTCCAGGAGGGGAACATCGAGGTGGTGAAAGAGTGGGGTGCAAGCACCGGTGAAACCCTGGAACCGGGTG
CAAACGTGATCGTGCCGATCAAACAGTCGACGGCGGTCGTGCCGGTCCGGCCCCAGGAGTACACGATGGCGAACGAAAAA
CAGGAGGGCGCCGAAGCGCGCGACGATTCCGTTGAGGTGCTCACGAACGACGGGGTGAGCGTCAACGTTGACGTGACGAT
CCGGTATCGTGTGAACAAGACGGAGGCCGCGACGTTCTACGACGAGTACAAGGACGTGAGCCAGGCCGAGGCGCGGTTGA
TTCGGCCGACCACCCAGGACGTGTTGCGGACGGAGGGTGGGGACATCGACACGACCGAGATCTACACCGGCGCGGGCCAA
AAGCAGATGGCGGCCGCGGTAAAGAAGGCGCTCGAGACGGAGGCCGTGGGCAGCGGGCTGATCATCGAGGCCGTCCAGAT
CCGGAACATCAAACTCCCGGGCCAGTACGCTGACGCCGTCGAGAAGAAGGAAGTCGAGAAGCAGAACATCGAGAAAAAGC
AGAACTCCATCCAGGTCGCGAAGGCTGAGGCGGAGCGCAAGCGCGTGCAGGCCAAGGGTGAGGCAGAGGCCAACGAGATC
GTTGCGGAGTCACTCAAGGACAACCCGGAGCTCATCAAGATCCGGTATATCGAGGCGCTGAACCAGGACAACAGCACGAT
CTACGTCGGCGCTGGCTCGCAGGCCGGGATCACGTTGACCAAGGACGTCGACGAGGAGAACAAGAGCTGA

Upstream 100 bases:

>100_bases
CAGAGGTCGCGCTCCGAGGTGCTCCGGCTGGTCGTGCGAGACGTCGCCGTGAGCGTGCCTCGCGGGTCGGACTGCGGTCT
GCGTGCTAAACACAACGGTT

Downstream 100 bases:

>100_bases
TGGCTGGGCGCCTGATCGTGTTCGGGTTGTTGTGGTTGGGGGCGATCGCGTTGGTGACGGTCGGCGCGTTCAGGTATTTC
AGCGAGCGCCAGCGGCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein; Membrane Protease; Spfh Domain Band 7 Family Protein; SPFH Domain / Band 7 Family / Prohibitin Protein; B-Cell Receptor Associated Protein-Related Protein; Spfh Domain Protein; HflC/HflK Family Protein; Bacteriophage/Transposase Fusion Protein; SPFH Domain Band 7 Family Protein; Tomatin/Podocin/Band 7/Nephrosis.2/SPFH Family Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKSLQLKVGAVVGAFVLVTVLVGGGLAWNPVQEGNIEVVKEWGASTGETLEPGANVIVPIKQSTAVVPVRPQEYTMANEK
QEGAEARDDSVEVLTNDGVSVNVDVTIRYRVNKTEAATFYDEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQ
KQMAAAVKKALETEAVGSGLIIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKKQNSIQVAKAEAERKRVQAKGEAEANEI
VAESLKDNPELIKIRYIEALNQDNSTIYVGAGSQAGITLTKDVDEENKS

Sequences:

>Translated_289_residues
MKSLQLKVGAVVGAFVLVTVLVGGGLAWNPVQEGNIEVVKEWGASTGETLEPGANVIVPIKQSTAVVPVRPQEYTMANEK
QEGAEARDDSVEVLTNDGVSVNVDVTIRYRVNKTEAATFYDEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQ
KQMAAAVKKALETEAVGSGLIIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKKQNSIQVAKAEAERKRVQAKGEAEANEI
VAESLKDNPELIKIRYIEALNQDNSTIYVGAGSQAGITLTKDVDEENKS
>Mature_289_residues
MKSLQLKVGAVVGAFVLVTVLVGGGLAWNPVQEGNIEVVKEWGASTGETLEPGANVIVPIKQSTAVVPVRPQEYTMANEK
QEGAEARDDSVEVLTNDGVSVNVDVTIRYRVNKTEAATFYDEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQ
KQMAAAVKKALETEAVGSGLIIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKKQNSIQVAKAEAERKRVQAKGEAEANEI
VAESLKDNPELIKIRYIEALNQDNSTIYVGAGSQAGITLTKDVDEENKS

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6005854, Length=199, Percent_Identity=30.1507537688442, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI221307584, Length=199, Percent_Identity=30.1507537688442, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31286; Mature: 31286

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLQLKVGAVVGAFVLVTVLVGGGLAWNPVQEGNIEVVKEWGASTGETLEPGANVIVPI
CCCEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
KQSTAVVPVRPQEYTMANEKQEGAEARDDSVEVLTNDGVSVNVDVTIRYRVNKTEAATFY
CCCCEEEEECCCCCCCCCCHHCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCCHHHHHH
DEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQKQMAAAVKKALETEAVGSGL
HHHHHHHHHHHHEECCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCE
IIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKKQNSIQVAKAEAERKRVQAKGEAEANEI
EEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VAESLKDNPELIKIRYIEALNQDNSTIYVGAGSQAGITLTKDVDEENKS
HHHHHCCCCCEEEEEEEEHHCCCCCEEEEECCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKSLQLKVGAVVGAFVLVTVLVGGGLAWNPVQEGNIEVVKEWGASTGETLEPGANVIVPI
CCCEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
KQSTAVVPVRPQEYTMANEKQEGAEARDDSVEVLTNDGVSVNVDVTIRYRVNKTEAATFY
CCCCEEEEECCCCCCCCCCHHCCCCCCCCCEEEEECCCEEEEEEEEEEEEECCCHHHHHH
DEYKDVSQAEARLIRPTTQDVLRTEGGDIDTTEIYTGAGQKQMAAAVKKALETEAVGSGL
HHHHHHHHHHHHEECCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCE
IIEAVQIRNIKLPGQYADAVEKKEVEKQNIEKKQNSIQVAKAEAERKRVQAKGEAEANEI
EEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VAESLKDNPELIKIRYIEALNQDNSTIYVGAGSQAGITLTKDVDEENKS
HHHHHCCCCCEEEEEEEEHHCCCCCEEEEECCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA