Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120145

GI number: 16120145

Start: 167863

End: 168282

Strand: Direct

Name: Not Available

Synonym: VNG6205C

Alternate gene names: NA

Gene position: 167863-168282 (Clockwise)

Preceding gene: 16120144

Following gene: 16120146

Centisome position: 45.94

GC content: 66.43

Gene sequence:

>420_bases
ATGGCAGTTCTTGTCCCCTACGACGGATCGAGTCCCGCACACGACGCCGTCGAACACGCCGTTGAGACGCACGACACCGA
CGAACTCGTGCTCCTGCACGTCACCGAGCTCGCGGACGGGATGCTCGACGCCGGCGTGGACATCGTCCAAGAGCAGCTGA
AAGGCCTCCAGAATCCGGCCAGCAGCGAGGGACTCACCGAGGAGACCCAGGCCCTCCTGGAGGACGCGGCGCTCTCGTTC
CGGATGGAGACGACAGTGGGGAACCCGGCGCGTGAGATCGTCTCGTTCGCGGAGGACAACGACATCACCGAGATCGTCAT
GGGGAGCCACGGGCGGCGTGGTGTCTCCCGTGTGCTGCTTGGGAGCGTCGCCGAAACGGTGGTGCGGCGCGCCCCGACGA
CCGTGACAGTCGTTCGGTGA

Upstream 100 bases:

>100_bases
CGCCGGGAACTGCCTGGTCGTCAGGCCCCCACAACGCGGAGTGACTGGGCGCTGGTCACACAACAGCGCGTTTTATGTGG
AGTGCTCGGCGAGGGTGCGT

Downstream 100 bases:

>100_bases
GGGCGGCTCACAGGTGAGAGGGGATCCGTGCTGTGGGGTCGGATGTAGCCGGACGCCCCACCATCGATGTGTAACGGCGG
GTCCATCGGTCAAGCACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: USP MJ0577 [H]

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAVLVPYDGSSPAHDAVEHAVETHDTDELVLLHVTELADGMLDAGVDIVQEQLKGLQNPASSEGLTEETQALLEDAALSF
RMETTVGNPAREIVSFAEDNDITEIVMGSHGRRGVSRVLLGSVAETVVRRAPTTVTVVR

Sequences:

>Translated_139_residues
MAVLVPYDGSSPAHDAVEHAVETHDTDELVLLHVTELADGMLDAGVDIVQEQLKGLQNPASSEGLTEETQALLEDAALSF
RMETTVGNPAREIVSFAEDNDITEIVMGSHGRRGVSRVLLGSVAETVVRRAPTTVTVVR
>Mature_138_residues
AVLVPYDGSSPAHDAVEHAVETHDTDELVLLHVTELADGMLDAGVDIVQEQLKGLQNPASSEGLTEETQALLEDAALSFR
METTVGNPAREIVSFAEDNDITEIVMGSHGRRGVSRVLLGSVAETVVRRAPTTVTVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 14846; Mature: 14715

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLVPYDGSSPAHDAVEHAVETHDTDELVLLHVTELADGMLDAGVDIVQEQLKGLQNPA
CEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCCC
SSEGLTEETQALLEDAALSFRMETTVGNPAREIVSFAEDNDITEIVMGSHGRRGVSRVLL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHH
GSVAETVVRRAPTTVTVVR
HHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
AVLVPYDGSSPAHDAVEHAVETHDTDELVLLHVTELADGMLDAGVDIVQEQLKGLQNPA
EEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCCC
SSEGLTEETQALLEDAALSFRMETTVGNPAREIVSFAEDNDITEIVMGSHGRRGVSRVLL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHH
GSVAETVVRRAPTTVTVVR
HHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9860944 [H]