| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120134
GI number: 16120134
Start: 161471
End: 161740
Strand: Reverse
Name: Not Available
Synonym: VNG6191H
Alternate gene names: NA
Gene position: 161740-161471 (Counterclockwise)
Preceding gene: 16120135
Following gene: 16120132
Centisome position: 44.26
GC content: 57.04
Gene sequence:
>270_bases ATGACTAAAGTCGAGTGGACATCAAAAGCACTCGATTTGCTAGACGGACTCGACATCGAAGCCCAAGAGCGACTGGTCAA GAAACTCGACGAGGCGAAAGACTGGACCTCTCACCGCCTCGAAAAGCTCACCGGCTACCCGTACTACAAGCTCCGCGCCG GCGACTACCGAGCGACGACAGGATCGAATGCCGTGTCGACCACGTCCTCCACGAGCAGAAGGTTTCCGTCGAGTCCGATG AGAGCGCTATTCCAGAGGGAGAGTCGCTGA
Upstream 100 bases:
>100_bases CTGTCCGAGGAAGCGCTCAAGCACCTGGCAGAGAGCCGCGAACAGCGAGAGCAGGGTGAGACGGTGTCCCAAGACGACGT GAAGGACCGCCTGCGCATCG
Downstream 100 bases:
>100_bases TCAGTTAGTGAAGAACTGTTCCCACAGGATGTCTGCAAGTGTGATTCCCGCATAGCCACCGACAACCATCACTAGGAAGG GAACGATGGCCTCGGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTKVEWTSKALDLLDGLDIEAQERLVKKLDEAKDWTSHRLEKLTGYPYYKLRAGDYRATTGSNAVSTTSSTSRRFPSSPM RALFQRESR
Sequences:
>Translated_89_residues MTKVEWTSKALDLLDGLDIEAQERLVKKLDEAKDWTSHRLEKLTGYPYYKLRAGDYRATTGSNAVSTTSSTSRRFPSSPM RALFQRESR >Mature_88_residues TKVEWTSKALDLLDGLDIEAQERLVKKLDEAKDWTSHRLEKLTGYPYYKLRAGDYRATTGSNAVSTTSSTSRRFPSSPMR ALFQRESR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10216; Mature: 10084
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVEWTSKALDLLDGLDIEAQERLVKKLDEAKDWTSHRLEKLTGYPYYKLRAGDYRATT CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCC GSNAVSTTSSTSRRFPSSPMRALFQRESR CCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure TKVEWTSKALDLLDGLDIEAQERLVKKLDEAKDWTSHRLEKLTGYPYYKLRAGDYRATT CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCC GSNAVSTTSSTSRRFPSSPMRALFQRESR CCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA