Click here to switch to the map view.

The map label for this gene is cat3

Identifier: 16120123

GI number: 16120123

Start: 152033

End: 152851

Strand: Direct

Name: cat3

Synonym: VNG6179G

Alternate gene names: NA

Gene position: 152033-152851 (Clockwise)

Preceding gene: 16120122

Following gene: 16120124

Centisome position: 41.6

GC content: 60.93

Gene sequence:

>819_bases
ATGTCAGCACGAAACGAAACCGGTTACGAGCGCGTGCTCGTTCCAGTCGGCGACAAGTCGGATCCGAACATGCTCACCGA
GCTGTCGAGCATCCTCGTAGACCCGAGGCGCGGTGCCGTTCGGTTCACGCATGTGACGACAGATCGGAGTTTCGTCGGAA
GCCAAGAGAACTGGCGCACGGGGTCCGATAGCGTCGCCGAAAGCCAACACACCCTTCGCGAAGAAGGGATCGAGAGTACA
GGGACGATCCGGACGGCCTCCTCAGCCCTAGACGGGATCCTGGAGGAAGCCGAGGAGTACGAAGCGGATGCCATCCTCAT
CGGGTGGACAGACAAGGACTCGGTGTCGAGTCTCGTCGACAAGCTCCTTCGGAAGGCGGGCTGTGACGTCATCGTCTTCA
GTGCCGACCGGGATCCGATAGACACTGACTCGATACTGGTGCCAGTGGTCGTCAAACCCGACGCAAACCGCCTCCAAATG
CTTGCGATCATGAGCCAACGAACTGGCGCCTCGATAACCTTCACGTACGTCACGGGCGACGAGGGAACGGACGAGGAGGG
ACGCGGCCTCCTCGATCAGTCGGCCGAACGGCTCGCCGAGTACGGGGTTCAAGCTGAGACTGAGCTCAAGAGCGCAAGCA
GTGCTGTCGACGCACTCGGCCAACTGTCCGAGGACTACGACGTGATGGTTATCGGGACCTCACGCGGGTGGTGGCTTCGG
AAGACGCTGTTCGGCCGGAAGACAGACAAGATCGCGCAAGAAGCGCAGTGCTCGCTTCTAATGCACAAGTGGCAGGGGGA
GGTGCCACCGGAGTCCTGA

Upstream 100 bases:

>100_bases
TCGAACTCAACCTCATGGTCCGAGACGCACTCAACGAGCAGAACGAGACTGACCAGAACAGCGATATGAACGCGTCCGAA
ATAGCGAACGGTGACCACTA

Downstream 100 bases:

>100_bases
GGGCCGCCGTGACAGACTCACGCAACGCGGCCGACGCTATCAACGCGTGAGCCGGCTCGTGTCGAACAGATTCAGACCGC
GAGAGCAACAACAAACAAGG

Product: cationic amino acid transporter

Products: NA

Alternate protein names: UspA Domain Protein; UpsA Domain-Containing Protein

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSARNETGYERVLVPVGDKSDPNMLTELSSILVDPRRGAVRFTHVTTDRSFVGSQENWRTGSDSVAESQHTLREEGIEST
GTIRTASSALDGILEEAEEYEADAILIGWTDKDSVSSLVDKLLRKAGCDVIVFSADRDPIDTDSILVPVVVKPDANRLQM
LAIMSQRTGASITFTYVTGDEGTDEEGRGLLDQSAERLAEYGVQAETELKSASSAVDALGQLSEDYDVMVIGTSRGWWLR
KTLFGRKTDKIAQEAQCSLLMHKWQGEVPPES

Sequences:

>Translated_272_residues
MSARNETGYERVLVPVGDKSDPNMLTELSSILVDPRRGAVRFTHVTTDRSFVGSQENWRTGSDSVAESQHTLREEGIEST
GTIRTASSALDGILEEAEEYEADAILIGWTDKDSVSSLVDKLLRKAGCDVIVFSADRDPIDTDSILVPVVVKPDANRLQM
LAIMSQRTGASITFTYVTGDEGTDEEGRGLLDQSAERLAEYGVQAETELKSASSAVDALGQLSEDYDVMVIGTSRGWWLR
KTLFGRKTDKIAQEAQCSLLMHKWQGEVPPES
>Mature_271_residues
SARNETGYERVLVPVGDKSDPNMLTELSSILVDPRRGAVRFTHVTTDRSFVGSQENWRTGSDSVAESQHTLREEGIESTG
TIRTASSALDGILEEAEEYEADAILIGWTDKDSVSSLVDKLLRKAGCDVIVFSADRDPIDTDSILVPVVVKPDANRLQML
AIMSQRTGASITFTYVTGDEGTDEEGRGLLDQSAERLAEYGVQAETELKSASSAVDALGQLSEDYDVMVIGTSRGWWLRK
TLFGRKTDKIAQEAQCSLLMHKWQGEVPPES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29792; Mature: 29661

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARNETGYERVLVPVGDKSDPNMLTELSSILVDPRRGAVRFTHVTTDRSFVGSQENWRT
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCC
GSDSVAESQHTLREEGIESTGTIRTASSALDGILEEAEEYEADAILIGWTDKDSVSSLVD
CCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
KLLRKAGCDVIVFSADRDPIDTDSILVPVVVKPDANRLQMLAIMSQRTGASITFTYVTGD
HHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECC
EGTDEEGRGLLDQSAERLAEYGVQAETELKSASSAVDALGQLSEDYDVMVIGTSRGWWLR
CCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
KTLFGRKTDKIAQEAQCSLLMHKWQGEVPPES
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SARNETGYERVLVPVGDKSDPNMLTELSSILVDPRRGAVRFTHVTTDRSFVGSQENWRT
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCC
GSDSVAESQHTLREEGIESTGTIRTASSALDGILEEAEEYEADAILIGWTDKDSVSSLVD
CCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
KLLRKAGCDVIVFSADRDPIDTDSILVPVVVKPDANRLQMLAIMSQRTGASITFTYVTGD
HHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECC
EGTDEEGRGLLDQSAERLAEYGVQAETELKSASSAVDALGQLSEDYDVMVIGTSRGWWLR
CCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
KTLFGRKTDKIAQEAQCSLLMHKWQGEVPPES
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA