| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120115
GI number: 16120115
Start: 142323
End: 142574
Strand: Reverse
Name: Not Available
Synonym: VNG6168H
Alternate gene names: NA
Gene position: 142574-142323 (Counterclockwise)
Preceding gene: 16120116
Following gene: 16120114
Centisome position: 39.02
GC content: 54.76
Gene sequence:
>252_bases ATGAGTAGCGACAGAATCGACGCCGAAAGCAAAGTGTCTGGGAACCAAGCGAACATCCCTGCTCGAATACGACGTGAACT CGATATTGACGACGGTGATCAGCTCCGCTGGCAGCTCGAAGATGACGGGAGTATCCGGGTGCAAGTCATCCAACAGCAGA CCGGCACATTCGCCAATTTCGACGGCTACGCTGGTGAGGAGGTAACTGACGTGACCAGCAATCACGACTCTTGGGGCGTC AACGTCGAGTAA
Upstream 100 bases:
>100_bases TCTCAAGATAAATCAGCAGCCTCTTCGTCGAATCTCCCGTTACGTACTGGGTGGTGTGGCGACACACTAGACTTTCGTGG TCTGTCACATACGTGGTGGT
Downstream 100 bases:
>100_bases ATGCCGCGCGCACTCATCGATACATCGGTTCTGTTTGCAGCCGCGTACAAGCGGGACGATTCACACGACACCGCACTTCC GGCGCTCCATGGCATCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSSDRIDAESKVSGNQANIPARIRRELDIDDGDQLRWQLEDDGSIRVQVIQQQTGTFANFDGYAGEEVTDVTSNHDSWGV NVE
Sequences:
>Translated_83_residues MSSDRIDAESKVSGNQANIPARIRRELDIDDGDQLRWQLEDDGSIRVQVIQQQTGTFANFDGYAGEEVTDVTSNHDSWGV NVE >Mature_82_residues SSDRIDAESKVSGNQANIPARIRRELDIDDGDQLRWQLEDDGSIRVQVIQQQTGTFANFDGYAGEEVTDVTSNHDSWGVN VE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9268; Mature: 9137
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDRIDAESKVSGNQANIPARIRRELDIDDGDQLRWQLEDDGSIRVQVIQQQTGTFANF CCCCCCCCCCCCCCCCCCCCCEEHEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCC DGYAGEEVTDVTSNHDSWGVNVE CCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure SSDRIDAESKVSGNQANIPARIRRELDIDDGDQLRWQLEDDGSIRVQVIQQQTGTFANF CCCCCCCCCCCCCCCCCCCCEEHEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCC DGYAGEEVTDVTSNHDSWGVNVE CCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA