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The map label for this gene is orc1

Identifier: 16120100

GI number: 16120100

Start: 129403

End: 130329

Strand: Direct

Name: orc1

Synonym: VNG6150G

Alternate gene names: 16120100

Gene position: 129403-130329 (Clockwise)

Preceding gene: 16120097

Following gene: 16120101

Centisome position: 35.41

GC content: 57.39

Gene sequence:

>927_bases
ATGATCACCGACGCACGAGTACTCCAGCCAGAATTCATCCCACGCGAGGTGCAACACCGGGACGCAGAAGTCAACTACCT
CTCCAGCGTCCTTAACCCACTCACGAAAGGCGAACGCGCCGACTCTGCGCTCCTATACGGGCCGTCAGGCGTCGGGAAAA
CCTGTATCGCGCAGTTCCTCGTCGAACAACTCCGTGGTGAGGTCGTCGCGCTCAACTACCAGTACGTCAACTGCTGGGAA
GACCACAGCCGGTTCCAAACCCTCTACCGCCTCCTCGACGGTATCGGGAAAACCGTCGATATTCACCGCCAATCCACACC
CACTGATGTCCACCTCAATCGTCTCCGCACTGCCGACGACACCTCGTACGTCGTCATTCTAGATGAAGTAGACCAGCTGG
AGGACAAGTCCCTGCTGTACGACCTCTACCGCATTCCCCATATCACGATGATTCTCATCGCCAACGATGAGGAAGACTTG
TTCGCGTCTCTCGACCAGCGACTCAATAGCCGCCTCACCGACTGTGAACGCATCCACTTCGACCCCTACCACGAAAACGA
ACTCATCCCCATCCTTCACGACCGCGTGCACTGGGGATTAGAAGAAGACGTCATCAGTGACTCACACCTCCAACTCATCG
CCGCGAACGCCGGCGGCGATGCCCGCGTCGTCATCGGAATCCTCCGCCACTCTGCGCGCACTGCACGCGAAACCGGTAGT
GACCAGATTACTGCGGACCTCATCGAGGAGGTGACTCCGGAAGCGAAATCGGAAATCAAACAACGAACCGTCGATCGCTT
CACCCCACACCAAGAACTCCTGTACAACATCATCACCGAACACGGGGAAATCTCACCGCAGGACCTCTACGACGCCTACT
GCACACGCACGGATGACCCCAAGACCAAGCGGATGGTCCGAAACTAG

Upstream 100 bases:

>100_bases
ACAAGTAAAAGGGATTGGGTGGGCGGCACATAGCATTCAGAAGATTCGGAAACGACACCCTTCCAATTATAATGTTGGCA
GCCTGCGTCGACGCAAACCC

Downstream 100 bases:

>100_bases
CTCTCCAAGCTCAAACACTACAACCTCATCACCGCCGAAGGCAACACGAAAGCCCGAACCTACCTCGTACAGGCGTAATT
CATCCCGCTACACGCGGTCG

Product: orc / cell division control protein 6

Products: NA

Alternate protein names: CDC6 homolog [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MITDARVLQPEFIPREVQHRDAEVNYLSSVLNPLTKGERADSALLYGPSGVGKTCIAQFLVEQLRGEVVALNYQYVNCWE
DHSRFQTLYRLLDGIGKTVDIHRQSTPTDVHLNRLRTADDTSYVVILDEVDQLEDKSLLYDLYRIPHITMILIANDEEDL
FASLDQRLNSRLTDCERIHFDPYHENELIPILHDRVHWGLEEDVISDSHLQLIAANAGGDARVVIGILRHSARTARETGS
DQITADLIEEVTPEAKSEIKQRTVDRFTPHQELLYNIITEHGEISPQDLYDAYCTRTDDPKTKRMVRN

Sequences:

>Translated_308_residues
MITDARVLQPEFIPREVQHRDAEVNYLSSVLNPLTKGERADSALLYGPSGVGKTCIAQFLVEQLRGEVVALNYQYVNCWE
DHSRFQTLYRLLDGIGKTVDIHRQSTPTDVHLNRLRTADDTSYVVILDEVDQLEDKSLLYDLYRIPHITMILIANDEEDL
FASLDQRLNSRLTDCERIHFDPYHENELIPILHDRVHWGLEEDVISDSHLQLIAANAGGDARVVIGILRHSARTARETGS
DQITADLIEEVTPEAKSEIKQRTVDRFTPHQELLYNIITEHGEISPQDLYDAYCTRTDDPKTKRMVRN
>Mature_308_residues
MITDARVLQPEFIPREVQHRDAEVNYLSSVLNPLTKGERADSALLYGPSGVGKTCIAQFLVEQLRGEVVALNYQYVNCWE
DHSRFQTLYRLLDGIGKTVDIHRQSTPTDVHLNRLRTADDTSYVVILDEVDQLEDKSLLYDLYRIPHITMILIANDEEDL
FASLDQRLNSRLTDCERIHFDPYHENELIPILHDRVHWGLEEDVISDSHLQLIAANAGGDARVVIGILRHSARTARETGS
DQITADLIEEVTPEAKSEIKQRTVDRFTPHQELLYNIITEHGEISPQDLYDAYCTRTDDPKTKRMVRN

Specific function: Might be involved in the initiation of DNA replication [H]

COG id: COG1474

COG function: function code LO; Cdc6-related protein, AAA superfamily ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDC6/cdc18 family [H]

Homologues:

Organism=Homo sapiens, GI4502703, Length=236, Percent_Identity=26.271186440678, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR015163
- InterPro:   IPR014277
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00004 AAA; PF09079 Cdc6_C [H]

EC number: NA

Molecular weight: Translated: 35315; Mature: 35315

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDARVLQPEFIPREVQHRDAEVNYLSSVLNPLTKGERADSALLYGPSGVGKTCIAQFL
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
VEQLRGEVVALNYQYVNCWEDHSRFQTLYRLLDGIGKTVDIHRQSTPTDVHLNRLRTADD
HHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCC
TSYVVILDEVDQLEDKSLLYDLYRIPHITMILIANDEEDLFASLDQRLNSRLTDCERIHF
CEEEEEECCHHCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHCCC
DPYHENELIPILHDRVHWGLEEDVISDSHLQLIAANAGGDARVVIGILRHSARTARETGS
CCCCCCCCCHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
DQITADLIEEVTPEAKSEIKQRTVDRFTPHQELLYNIITEHGEISPQDLYDAYCTRTDDP
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
KTKRMVRN
HHHHHCCC
>Mature Secondary Structure
MITDARVLQPEFIPREVQHRDAEVNYLSSVLNPLTKGERADSALLYGPSGVGKTCIAQFL
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH
VEQLRGEVVALNYQYVNCWEDHSRFQTLYRLLDGIGKTVDIHRQSTPTDVHLNRLRTADD
HHHHCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCC
TSYVVILDEVDQLEDKSLLYDLYRIPHITMILIANDEEDLFASLDQRLNSRLTDCERIHF
CEEEEEECCHHCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHCCC
DPYHENELIPILHDRVHWGLEEDVISDSHLQLIAANAGGDARVVIGILRHSARTARETGS
CCCCCCCCCHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
DQITADLIEEVTPEAKSEIKQRTVDRFTPHQELLYNIITEHGEISPQDLYDAYCTRTDDP
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
KTKRMVRN
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA