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Identifier: 16120068

GI number: 16120068

Start: 83525

End: 84766

Strand: Reverse

Name: Not Available

Synonym: VNG6112H

Alternate gene names: NA

Gene position: 84766-83525 (Counterclockwise)

Preceding gene: 16120069

Following gene: 16120066

Centisome position: 23.2

GC content: 64.09

Gene sequence:

>1242_bases
ATGAATCAGAACACCTCATCGACACGCGATGGTTCGACACCGCTCGACGACAGCTTCGAGCGGTACCTCCAGGACAAGGG
GAAAGGCCGCGGTGGCGACGGCGGGAACTATCGACGCAACGCGGCGCGCGAGCTCGAGCGGCTTGCTGAGTGGGCCGCTG
GGGACCGCGGTGATGACGACTGGACCGGGATCGTCCCCGACGATGTCGACCGCGACCCCACCTTTGAGGACCTCGACGAG
CGCGTCTTTCGGGAGTACGCCCGGCATCTCGCTGGTGACCGTGGACTCAAACAGAATACGGTACAAACCTATTATCGCTA
TATCTCTGCGTGGTGTGGCTGGTGCGTAAACGAGGGGTACCTCGAGGCGCACTACGCGCAGCGGGCGAGCGCGATGGCAC
CACTTCCTGAAGACGATGGACGTAAGCCCGGTGACCAGCAGGCCTGGACGTCCGAGCAGCGCCACACGCTCACCCGGCAC
GTCGACGAACGGGCCCGCGACGCCGTCGAGGCGTACGCGACACTCCCGGCGGATACTGATCCCCTCGACAAGCAGCGAGC
GCGCTATGCAGCGCTGAAGGCGGCTCGTGACCGGGCTTTGGTGTTCGTCCTCGCGTACACGGCCGTTCGGGTCGGGGAAC
TCCTTCGGGATCCGAACGATCCGCGCCGGCGCGGGGTTCGGTGGGAGGACCTCTCGCTCGACGACGGGAGTATGGACGTC
TACCGGAAGAAACAGCAGTGGGACGCCGCCAGTCTCCCCGACCCGGTGATCTCGCCGCTGCGGAGCTACCGCCAGCTGAT
GGACCCGCCGACGGAACGCTGGCCGGTGTTTCCGACGTTTGACCACCGGACGCTCGCGACGATCGTGCAGGACGGGCTGG
CCGACCAAGGGGAACGTCCGGATACGATCACTGAGCAACGGGACGAGTACGCACGTAACCTCTTACTGGCGCTCGACGAG
GATGTCCGACCGCCGTCGATCACGACGGATGGCGCACGGTCGATTCTCCAGCGACTCTCAGACGCAGCGGAGATCGACAT
CGACCATCCGAAACACGATTATCTCGCCCCTCACGGCGGTCGACGTGGGATGGGAGAGGTGCTCGTCCGCGCGTTCGGGT
ACACGGTGGCGGCCCGATATCTCGACAATTCTGAGGAGATGGTGCGAGAGCGGTACTCTCATATTGAGGCCGGGGAATTG
GGTGATGTCGCTACGGAAGCTCTGGAAGAAATCGACCAATAA

Upstream 100 bases:

>100_bases
GGGCTGGACCGGATACAACGCCGTGAAAGCTGCGTGGGAGGCGATCCCGATTGATTGTAGTGATATTCTGGACGACCACC
TGCTCCCGTGACGAAACCGT

Downstream 100 bases:

>100_bases
AGGACTACGTTAGTCGGACTCTTGGATATCGTACCACCGGATTTTGAATGGATAGGTGGGGTCAACCACTAATTCAAACG
CCGAGTTTTCGGGGAAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Site-Specific Recombinase; Site-Specific Recombinase XerD-Like Protein; Phage Integrase; Site-Specific Recombinase XerD

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNQNTSSTRDGSTPLDDSFERYLQDKGKGRGGDGGNYRRNAARELERLAEWAAGDRGDDDWTGIVPDDVDRDPTFEDLDE
RVFREYARHLAGDRGLKQNTVQTYYRYISAWCGWCVNEGYLEAHYAQRASAMAPLPEDDGRKPGDQQAWTSEQRHTLTRH
VDERARDAVEAYATLPADTDPLDKQRARYAALKAARDRALVFVLAYTAVRVGELLRDPNDPRRRGVRWEDLSLDDGSMDV
YRKKQQWDAASLPDPVISPLRSYRQLMDPPTERWPVFPTFDHRTLATIVQDGLADQGERPDTITEQRDEYARNLLLALDE
DVRPPSITTDGARSILQRLSDAAEIDIDHPKHDYLAPHGGRRGMGEVLVRAFGYTVAARYLDNSEEMVRERYSHIEAGEL
GDVATEALEEIDQ

Sequences:

>Translated_413_residues
MNQNTSSTRDGSTPLDDSFERYLQDKGKGRGGDGGNYRRNAARELERLAEWAAGDRGDDDWTGIVPDDVDRDPTFEDLDE
RVFREYARHLAGDRGLKQNTVQTYYRYISAWCGWCVNEGYLEAHYAQRASAMAPLPEDDGRKPGDQQAWTSEQRHTLTRH
VDERARDAVEAYATLPADTDPLDKQRARYAALKAARDRALVFVLAYTAVRVGELLRDPNDPRRRGVRWEDLSLDDGSMDV
YRKKQQWDAASLPDPVISPLRSYRQLMDPPTERWPVFPTFDHRTLATIVQDGLADQGERPDTITEQRDEYARNLLLALDE
DVRPPSITTDGARSILQRLSDAAEIDIDHPKHDYLAPHGGRRGMGEVLVRAFGYTVAARYLDNSEEMVRERYSHIEAGEL
GDVATEALEEIDQ
>Mature_413_residues
MNQNTSSTRDGSTPLDDSFERYLQDKGKGRGGDGGNYRRNAARELERLAEWAAGDRGDDDWTGIVPDDVDRDPTFEDLDE
RVFREYARHLAGDRGLKQNTVQTYYRYISAWCGWCVNEGYLEAHYAQRASAMAPLPEDDGRKPGDQQAWTSEQRHTLTRH
VDERARDAVEAYATLPADTDPLDKQRARYAALKAARDRALVFVLAYTAVRVGELLRDPNDPRRRGVRWEDLSLDDGSMDV
YRKKQQWDAASLPDPVISPLRSYRQLMDPPTERWPVFPTFDHRTLATIVQDGLADQGERPDTITEQRDEYARNLLLALDE
DVRPPSITTDGARSILQRLSDAAEIDIDHPKHDYLAPHGGRRGMGEVLVRAFGYTVAARYLDNSEEMVRERYSHIEAGEL
GDVATEALEEIDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46955; Mature: 46955

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA