| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120056
GI number: 16120056
Start: 71971
End: 72222
Strand: Direct
Name: Not Available
Synonym: VNG6094H
Alternate gene names: NA
Gene position: 71971-72222 (Clockwise)
Preceding gene: 16120055
Following gene: 16120065
Centisome position: 19.7
GC content: 48.81
Gene sequence:
>252_bases ATGGACCAGAATGGCGGTCCGAAGCTAACTCCGCTTCACGACCGGTTCATTATCACCGAAAAAAGCCGGAGTTGGATACT GGGGACGTCTTTCAACTCGTTAGATACGAACGTCTCGATCATCTCCGAGCTCCCTATGCGTGTTACTCAGACTTTAGATA GACAGTTCAACCGTTGGTGGACAGAACCAGTTGAGCAGAAAGACGAGAGGCAGAATTGCAATAAATCTAGAAGTGGGATC AGCCAGCTCTGA
Upstream 100 bases:
>100_bases TGTCTGGTTCATAACTTCGGTATTACGAAATGCATCGCAGTTGGAAAGCGAATTGACCAGGTACAAGAATCAGGGACAAA CCGTAGAGATTCTAAGGATT
Downstream 100 bases:
>100_bases TTAGAGGTAATGACGAGACTATAGCCAGCATTGGTTGACGAAGCTGGTACAGTTTTCCTTCGAAATGAACCTGCTCAGGA GACATTCTATCCGAAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MDQNGGPKLTPLHDRFIITEKSRSWILGTSFNSLDTNVSIISELPMRVTQTLDRQFNRWWTEPVEQKDERQNCNKSRSGI SQL
Sequences:
>Translated_83_residues MDQNGGPKLTPLHDRFIITEKSRSWILGTSFNSLDTNVSIISELPMRVTQTLDRQFNRWWTEPVEQKDERQNCNKSRSGI SQL >Mature_83_residues MDQNGGPKLTPLHDRFIITEKSRSWILGTSFNSLDTNVSIISELPMRVTQTLDRQFNRWWTEPVEQKDERQNCNKSRSGI SQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9678; Mature: 9678
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQNGGPKLTPLHDRFIITEKSRSWILGTSFNSLDTNVSIISELPMRVTQTLDRQFNRWW CCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC TEPVEQKDERQNCNKSRSGISQL CCCHHHHHHHHHCCHHHCCCCCC >Mature Secondary Structure MDQNGGPKLTPLHDRFIITEKSRSWILGTSFNSLDTNVSIISELPMRVTQTLDRQFNRWW CCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC TEPVEQKDERQNCNKSRSGISQL CCCHHHHHHHHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA