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The map label for this gene is sojC1

Identifier: 16120050

GI number: 16120050

Start: 65313

End: 66251

Strand: Reverse

Name: sojC1

Synonym: VNG6086G

Alternate gene names: 16120050

Gene position: 66251-65313 (Counterclockwise)

Preceding gene: 16120051

Following gene: 16120049

Centisome position: 18.13

GC content: 56.55

Gene sequence:

>939_bases
ATGGCGGGAACGAATAGCGGGAATAGCATAGATAGCACGAATAGCCCAAATAGCCCGTACGACTCCGTGGATACAGCGGG
GAATTCTCGGGCTGTCTCAGTCTGCATGCTGAAGGGTGGCGTTGGCAAGTCAACCATCGCAGTGAATCTCGCGCGTCAAC
TCGCCACCCACGACCATGATGTCCTCCTCATTGACCTCGATCCGAATGGACACGCTTCAGTCGGTCTCGGGTTCGATGAC
CACTATCACAATACAGACGAGGGCATCGGTGAGGTATTCTTCGATGAGGCAGATCCAACCTCAGTCGTCTACGATACCGA
ATATGAATTCGATATCCTTCCCTCGAGCGAGGATCTCGAGCAAGTCGAGCGAGAAATCGTCGTCGGTGACGTCTTCCAGC
CGTCTGCTCTGTTGAAGCGCGAAGTCGTTGAGCCGCTGCTGGGCGACGAATACGACTTCATCGTCACGGACTCGCCCGCA
TATCGCTCGCGACTGACCGACAACGCTCTCGTCGCGACGTCTAATCTTGTTCTTCCACTAGCGCCCGGCAACGAGGCGAT
GTCCGGACTGGAACGCACTATCGAGCGCCAGATTGCTCCGCTGCGAAAGCACATGGACGTCGACGTCCTCGCACTCGTCC
CGAATATGCTGGATGGGCGTATCGACCAGCAAACGCAAGATCGCCAGCTCCTCGAACGGCTGAACTCCCACAACAGCTTG
CAGGACCGTATTCCGAACTTCGCTCGAATCACGGATTGGGAGGCTGTGGGCAGCGGCGACATTAGTCCGACACCAGGTAT
CCGAGACCGAACGAGTATCACGAAAGCGTACGGTGAACGCAAACCGCTATTGGACTACGACGCCAACTGTGATCAACTGA
AGAATTTCGACGAACTCGCGCACATCGTCGAGGCCGGTGAGGTGGTCCGGCATGGCTGA

Upstream 100 bases:

>100_bases
ATGCTATTCTAACTATTCAAACTATACGGGCTATCTTGACGATTCAGGCTATTCACTGCCCTTAGTTATAAGAGGGGATA
GGGCACTATTCCAGAATAGC

Downstream 100 bases:

>100_bases
CGACGGTGACCCGTTCGCAGATCTTAGTCAGACGCTGGATGACGATGCTGACGATCAGGACGAGACGAAGAGTGAACAGG
AACCGCGCGAGCCACCCGCC

Product: Spo0A activation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAGTNSGNSIDSTNSPNSPYDSVDTAGNSRAVSVCMLKGGVGKSTIAVNLARQLATHDHDVLLIDLDPNGHASVGLGFDD
HYHNTDEGIGEVFFDEADPTSVVYDTEYEFDILPSSEDLEQVEREIVVGDVFQPSALLKREVVEPLLGDEYDFIVTDSPA
YRSRLTDNALVATSNLVLPLAPGNEAMSGLERTIERQIAPLRKHMDVDVLALVPNMLDGRIDQQTQDRQLLERLNSHNSL
QDRIPNFARITDWEAVGSGDISPTPGIRDRTSITKAYGERKPLLDYDANCDQLKNFDELAHIVEAGEVVRHG

Sequences:

>Translated_312_residues
MAGTNSGNSIDSTNSPNSPYDSVDTAGNSRAVSVCMLKGGVGKSTIAVNLARQLATHDHDVLLIDLDPNGHASVGLGFDD
HYHNTDEGIGEVFFDEADPTSVVYDTEYEFDILPSSEDLEQVEREIVVGDVFQPSALLKREVVEPLLGDEYDFIVTDSPA
YRSRLTDNALVATSNLVLPLAPGNEAMSGLERTIERQIAPLRKHMDVDVLALVPNMLDGRIDQQTQDRQLLERLNSHNSL
QDRIPNFARITDWEAVGSGDISPTPGIRDRTSITKAYGERKPLLDYDANCDQLKNFDELAHIVEAGEVVRHG
>Mature_311_residues
AGTNSGNSIDSTNSPNSPYDSVDTAGNSRAVSVCMLKGGVGKSTIAVNLARQLATHDHDVLLIDLDPNGHASVGLGFDDH
YHNTDEGIGEVFFDEADPTSVVYDTEYEFDILPSSEDLEQVEREIVVGDVFQPSALLKREVVEPLLGDEYDFIVTDSPAY
RSRLTDNALVATSNLVLPLAPGNEAMSGLERTIERQIAPLRKHMDVDVLALVPNMLDGRIDQQTQDRQLLERLNSHNSLQ
DRIPNFARITDWEAVGSGDISPTPGIRDRTSITKAYGERKPLLDYDANCDQLKNFDELAHIVEAGEVVRHG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 34213; Mature: 34082

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTNSGNSIDSTNSPNSPYDSVDTAGNSRAVSVCMLKGGVGKSTIAVNLARQLATHDHD
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCC
VLLIDLDPNGHASVGLGFDDHYHNTDEGIGEVFFDEADPTSVVYDTEYEFDILPSSEDLE
EEEEEECCCCCEEEECCCCCCCCCCCCCHHHHEECCCCCCEEEEECCCCEEECCCHHHHH
QVEREIVVGDVFQPSALLKREVVEPLLGDEYDFIVTDSPAYRSRLTDNALVATSNLVLPL
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEEECCEEEEE
APGNEAMSGLERTIERQIAPLRKHMDVDVLALVPNMLDGRIDQQTQDRQLLERLNSHNSL
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH
QDRIPNFARITDWEAVGSGDISPTPGIRDRTSITKAYGERKPLLDYDANCDQLKNFDELA
HHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHH
HIVEAGEVVRHG
HHHHHHHHHHCC
>Mature Secondary Structure 
AGTNSGNSIDSTNSPNSPYDSVDTAGNSRAVSVCMLKGGVGKSTIAVNLARQLATHDHD
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCC
VLLIDLDPNGHASVGLGFDDHYHNTDEGIGEVFFDEADPTSVVYDTEYEFDILPSSEDLE
EEEEEECCCCCEEEECCCCCCCCCCCCCHHHHEECCCCCCEEEEECCCCEEECCCHHHHH
QVEREIVVGDVFQPSALLKREVVEPLLGDEYDFIVTDSPAYRSRLTDNALVATSNLVLPL
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEEECCEEEEE
APGNEAMSGLERTIERQIAPLRKHMDVDVLALVPNMLDGRIDQQTQDRQLLERLNSHNSL
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH
QDRIPNFARITDWEAVGSGDISPTPGIRDRTSITKAYGERKPLLDYDANCDQLKNFDELA
HHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHH
HIVEAGEVVRHG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]