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The map label for this gene is gvpH1

Identifier: 16119998

GI number: 16119998

Start: 18658

End: 19206

Strand: Reverse

Name: gvpH1

Synonym: VNG6024G

Alternate gene names: 16119998

Gene position: 19206-18658 (Counterclockwise)

Preceding gene: 16119999

Following gene: 16119997

Centisome position: 5.26

GC content: 61.02

Gene sequence:

>549_bases
ATGGTACCCGACGAAAACGACGACGCGTCCGACGACCAGTCTTCCCAGCTCAGCGGGCTGCTCGACCAATTGCACACGCT
CGTCGAGGTGCTCGCCGACATCGAAGAGGAGGGCGGTCACCGACACGAGTCAGGCCGTATCGACCGGGGAAACGCCCGAA
TTGATTACGACTACGACGTTTCCATCGGGCTGGGACGAGCGGACGGGTCGTCCTACGACGAGGAACCATCGTCCAATCGG
TCCCGCTCCGAACAGCGATCCGGTCAGCAAAGGACGACGGAGGATTCGATTCACGTCGAGACTCGTGGAGGAACGAGCGG
CGACGAACTCGTCGTGGTCGCAGATTTGCCGGGCGTGACGGACGACGACGTCGACGTCGCACTCGATACCGACGAGCAGG
CACTCACGCTACGCGTCGACGACGACGTGGTCGAGCGAGTCGTACTCGACCGGCCGGACGTGGCGATCACCGATATGACT
CTCAGAAATCAGGTTCTCGAAATTCGGCTAGCACGAACATCGGACACCGATGGAGGTGAATCCACATGA

Upstream 100 bases:

>100_bases
ACGAGGAGTACCAGCAGCGCAAGCAAGCACTCGAATCGCAACTGGAGATGGCCGAGCAGGTCCAAGAACAGATGCGTGAC
CGCATGGAGGTCAAGAAATA

Downstream 100 bases:

>100_bases
GCGACAAACAACAGCAAAAACACAAGCAGAAAGCACGACAGGCACGAGTAAAGGCGCAGATCAACCGCGATAAAGCCCGG
CGCAATCTGCTTCGGCAGCG

Product: GvpH protein, cluster A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVPDENDDASDDQSSQLSGLLDQLHTLVEVLADIEEEGGHRHESGRIDRGNARIDYDYDVSIGLGRADGSSYDEEPSSNR
SRSEQRSGQQRTTEDSIHVETRGGTSGDELVVVADLPGVTDDDVDVALDTDEQALTLRVDDDVVERVVLDRPDVAITDMT
LRNQVLEIRLARTSDTDGGEST

Sequences:

>Translated_182_residues
MVPDENDDASDDQSSQLSGLLDQLHTLVEVLADIEEEGGHRHESGRIDRGNARIDYDYDVSIGLGRADGSSYDEEPSSNR
SRSEQRSGQQRTTEDSIHVETRGGTSGDELVVVADLPGVTDDDVDVALDTDEQALTLRVDDDVVERVVLDRPDVAITDMT
LRNQVLEIRLARTSDTDGGEST
>Mature_182_residues
MVPDENDDASDDQSSQLSGLLDQLHTLVEVLADIEEEGGHRHESGRIDRGNARIDYDYDVSIGLGRADGSSYDEEPSSNR
SRSEQRSGQQRTTEDSIHVETRGGTSGDELVVVADLPGVTDDDVDVALDTDEQALTLRVDDDVVERVVLDRPDVAITDMT
LRNQVLEIRLARTSDTDGGEST

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPH1_HALSA (P24372)

Other databases:

- EMBL:   M58557
- EMBL:   X55648
- EMBL:   AF016485
- EMBL:   AE004438
- PIR:   T08237
- RefSeq:   NP_045965.1
- RefSeq:   NP_395586.1
- GeneID:   1446780
- GeneID:   1449262
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AF016485_GR
- KEGG:   hal:VNG6024G
- HOGENOM:   HBG096368
- OMA:   YDISIGI
- ProtClustDB:   CLSK539581
- BioCyc:   HSP64091:GVPH-MONOMER
- BioCyc:   HSP64091:VNG6024G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR008633

Pfam domain/function: PF05455 GvpH

EC number: NA

Molecular weight: Translated: 19883; Mature: 19883

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPDENDDASDDQSSQLSGLLDQLHTLVEVLADIEEEGGHRHESGRIDRGNARIDYDYDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEEE
SIGLGRADGSSYDEEPSSNRSRSEQRSGQQRTTEDSIHVETRGGTSGDELVVVADLPGVT
EEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
DDDVDVALDTDEQALTLRVDDDVVERVVLDRPDVAITDMTLRNQVLEIRLARTSDTDGGE
CCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEECHHHHCEEEEEEEEECCCCCCCC
ST
CC
>Mature Secondary Structure
MVPDENDDASDDQSSQLSGLLDQLHTLVEVLADIEEEGGHRHESGRIDRGNARIDYDYDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEEE
SIGLGRADGSSYDEEPSSNRSRSEQRSGQQRTTEDSIHVETRGGTSGDELVVVADLPGVT
EEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
DDDVDVALDTDEQALTLRVDDDVVERVVLDRPDVAITDMTLRNQVLEIRLARTSDTDGGE
CCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEECHHHHCEEEEEEEEECCCCCCCC
ST
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1864501; 1956294; 9847077; 11016950