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The map label for this gene is gvpM1

Identifier: 16119993

GI number: 16119993

Start: 16451

End: 16705

Strand: Reverse

Name: gvpM1

Synonym: VNG6019G

Alternate gene names: 16119993

Gene position: 16705-16451 (Counterclockwise)

Preceding gene: 16119994

Following gene: 16119990

Centisome position: 4.57

GC content: 60.39

Gene sequence:

>255_bases
ATGGAGCCAACAAAAGACGAGACACACGCGATCGTTGAGTTCGTCGACGTGTTACTGCGCGACGGAGCCGTGATTCAAGC
GGACGTGATCGTGACGGTCGCCGACATTCCCCTGATCGGGATCAGCCTCCGGGCAGCGATTGCTGGCATGACCACCATGA
CGGAGTACGGCCTGTTCGAGGAGTGGGATGCTGCGCATCGACAACAGAGCGAAGCGTTCACGACCTCGCCCACTGCCGAT
CGGCGAGAGGACTGA

Upstream 100 bases:

>100_bases
TCGGTGATCGATTGGATACGATCGTCGAACACGAGGGTGTAGAGATCAGATTCACGGGGCCGTGGCCACCGTACACGTTC
GCGCCAGATATTGGTAAATA

Downstream 100 bases:

>100_bases
TTCGAGGTCGTGTCGCGTGAGAATAAAGGAGAGGGATAATGCGGAAACCCAACTGGGATATGTTGAATCACAGCGGTGGC
GAGGCGAAAGACCACCGGTT

Product: GvpM protein, cluster A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MEPTKDETHAIVEFVDVLLRDGAVIQADVIVTVADIPLIGISLRAAIAGMTTMTEYGLFEEWDAAHRQQSEAFTTSPTAD
RRED

Sequences:

>Translated_84_residues
MEPTKDETHAIVEFVDVLLRDGAVIQADVIVTVADIPLIGISLRAAIAGMTTMTEYGLFEEWDAAHRQQSEAFTTSPTAD
RRED
>Mature_84_residues
MEPTKDETHAIVEFVDVLLRDGAVIQADVIVTVADIPLIGISLRAAIAGMTTMTEYGLFEEWDAAHRQQSEAFTTSPTAD
RRED

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPM1_HALSA (P24377)

Other databases:

- EMBL:   M58557
- EMBL:   X55648
- EMBL:   AF016485
- EMBL:   AE004438
- PIR:   T08232
- RefSeq:   NP_045960.1
- RefSeq:   NP_395581.1
- GeneID:   1446775
- GeneID:   1449267
- GenomeReviews:   AE004438_GR
- GenomeReviews:   AF016485_GR
- KEGG:   hal:VNG6019G
- HOGENOM:   HBG491865
- OMA:   NDTHAIV
- ProtClustDB:   CLSK782108
- BioCyc:   HSP64091:GVPM-MONOMER
- BioCyc:   HSP64091:VNG6019G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR000638
- InterPro:   IPR018493

Pfam domain/function: PF00741 Gas_vesicle

EC number: NA

Molecular weight: Translated: 9248; Mature: 9248

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS00234 GAS_VESICLE_A_1; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPTKDETHAIVEFVDVLLRDGAVIQADVIVTVADIPLIGISLRAAIAGMTTMTEYGLFE
CCCCCHHHHHHHHHHHHHHHCCCEEEEHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCH
EWDAAHRQQSEAFTTSPTADRRED
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPTKDETHAIVEFVDVLLRDGAVIQADVIVTVADIPLIGISLRAAIAGMTTMTEYGLFE
CCCCCHHHHHHHHHHHHHHHCCCEEEEHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCH
EWDAAHRQQSEAFTTSPTADRRED
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1864501; 1956294; 9847077; 11016950