| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 16119926
Identifier: 16119926
GI number: 16119926
Start: 132286
End: 133200
Strand: Direct
Name: 16119926
Synonym: Atu6111
Alternate gene names: NA
Gene position: 132286-133200 (Clockwise)
Preceding gene: 41223337
Following gene: 159161975
Centisome position: 61.75
GC content: 61.64
Gene sequence:
>915_bases ATGCTACTGGTTCCGAACTTTACCGGGGACGGCGCGTCCTCCCCGATCCGGCTGCGGGCGCTTTCGCTCGGCGCCGGCGT CCAGTCCACCACCATGGCGCTGATGGCAGCGCATGGTGAGATCGGGCCGATACCCGATTGCGCGATCTTCGCCGATACCG GTTGGGAGCCGAAAGCCGTCTACGATCATCTCGAATGGTTGATGTCGCCGAATGTCCTTCCGTTCCCGGTCCATGTCGTG TCGGGCGGCAATATTCTCGACAATCTCATGGACGCCGCCGCCGGCAAACGGTGGGCTTCGATTCCGGCTTTTGCGAAAAC CGTGACGCCAGCCGGGAGCGCACGACCGGTTCTCGATGAGGACGATGACGGCGAACTCGTCCAGATCGGTTCCCGCGCGA CATCGCGCGAGACCGTATCGATCGGCATGATGCGCAGGGCCTGCACTGCGGATTACAAGATCGTGCCGATCCGGAGGAAG GTCCGGGAATTGTTGGGCCTCACGCGCAAGCGATCACCGGATCATGCGGTCGCGGAGCAGTGGATTGGCATTTCGACAGA CGAGGCCAGCCGGATCAAACCCTCGTTCGAGGACTGGCAGATCAATCGTTGGCCGTTGATCGAACAGCGCATGAGCAGGC GCGATTGCCTGGCCTGGTTGCGCCGTCATGATTATCCGACGCCCCCGAAATCGGCCTGCATCGGATGCCCGTTTCACGAT AACGGACGCTGGCGCCACATGCGTGATCATGATCCGGAAGCCTGGGCAGAGGCGGTGATAGTCGATCGAGCGCTGCGGAC CGGCATTCGACGCATCCGTGGCGAAGTCTATCTTCATCGCTCATGTGTTCCTCTTGACGAAGCCGACCTGTCGACGGCCG CCGATCATGGCCAACTCGATCTCTGGCCCATCTAA
Upstream 100 bases:
>100_bases ACAAGCGGGCGATCTTCAATGCGGCGGCGCATGCGCAGCGCGCTGTCGCCTATCTGCACGACCTTCAGCCGCAGCCGGCT TCCGGACAGGAGGCGGCCTG
Downstream 100 bases:
>100_bases TGCGAAGGCATCTGTGGCGTCTAGGGCAGCCTTCTGGCGCTGCGGTAACGGATGACCGCTCCATTTGGAGCGGAAGAGGC ACCGCCATATGGTGGAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAVYDHLEWLMSPNVLPFPVHVV SGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDEDDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRK VRELLGLTRKRSPDHAVAEQWIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLDLWPI
Sequences:
>Translated_304_residues MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAVYDHLEWLMSPNVLPFPVHVV SGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDEDDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRK VRELLGLTRKRSPDHAVAEQWIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLDLWPI >Mature_304_residues MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAVYDHLEWLMSPNVLPFPVHVV SGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDEDDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRK VRELLGLTRKRSPDHAVAEQWIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLDLWPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33850; Mature: 33850
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAV CEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH YDHLEWLMSPNVLPFPVHVVSGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDE HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCHHHHHCCCCCCCCCCCCC DDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRKVRELLGLTRKRSPDHAVAEQ CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHH WIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD HCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEE LWPI ECCC >Mature Secondary Structure MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAV CEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH YDHLEWLMSPNVLPFPVHVVSGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDE HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCHHHHHCCCCCCCCCCCCC DDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRKVRELLGLTRKRSPDHAVAEQ CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHH WIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD HCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEE LWPI ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA