Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 16119926

Identifier: 16119926

GI number: 16119926

Start: 132286

End: 133200

Strand: Direct

Name: 16119926

Synonym: Atu6111

Alternate gene names: NA

Gene position: 132286-133200 (Clockwise)

Preceding gene: 41223337

Following gene: 159161975

Centisome position: 61.75

GC content: 61.64

Gene sequence:

>915_bases
ATGCTACTGGTTCCGAACTTTACCGGGGACGGCGCGTCCTCCCCGATCCGGCTGCGGGCGCTTTCGCTCGGCGCCGGCGT
CCAGTCCACCACCATGGCGCTGATGGCAGCGCATGGTGAGATCGGGCCGATACCCGATTGCGCGATCTTCGCCGATACCG
GTTGGGAGCCGAAAGCCGTCTACGATCATCTCGAATGGTTGATGTCGCCGAATGTCCTTCCGTTCCCGGTCCATGTCGTG
TCGGGCGGCAATATTCTCGACAATCTCATGGACGCCGCCGCCGGCAAACGGTGGGCTTCGATTCCGGCTTTTGCGAAAAC
CGTGACGCCAGCCGGGAGCGCACGACCGGTTCTCGATGAGGACGATGACGGCGAACTCGTCCAGATCGGTTCCCGCGCGA
CATCGCGCGAGACCGTATCGATCGGCATGATGCGCAGGGCCTGCACTGCGGATTACAAGATCGTGCCGATCCGGAGGAAG
GTCCGGGAATTGTTGGGCCTCACGCGCAAGCGATCACCGGATCATGCGGTCGCGGAGCAGTGGATTGGCATTTCGACAGA
CGAGGCCAGCCGGATCAAACCCTCGTTCGAGGACTGGCAGATCAATCGTTGGCCGTTGATCGAACAGCGCATGAGCAGGC
GCGATTGCCTGGCCTGGTTGCGCCGTCATGATTATCCGACGCCCCCGAAATCGGCCTGCATCGGATGCCCGTTTCACGAT
AACGGACGCTGGCGCCACATGCGTGATCATGATCCGGAAGCCTGGGCAGAGGCGGTGATAGTCGATCGAGCGCTGCGGAC
CGGCATTCGACGCATCCGTGGCGAAGTCTATCTTCATCGCTCATGTGTTCCTCTTGACGAAGCCGACCTGTCGACGGCCG
CCGATCATGGCCAACTCGATCTCTGGCCCATCTAA

Upstream 100 bases:

>100_bases
ACAAGCGGGCGATCTTCAATGCGGCGGCGCATGCGCAGCGCGCTGTCGCCTATCTGCACGACCTTCAGCCGCAGCCGGCT
TCCGGACAGGAGGCGGCCTG

Downstream 100 bases:

>100_bases
TGCGAAGGCATCTGTGGCGTCTAGGGCAGCCTTCTGGCGCTGCGGTAACGGATGACCGCTCCATTTGGAGCGGAAGAGGC
ACCGCCATATGGTGGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAVYDHLEWLMSPNVLPFPVHVV
SGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDEDDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRK
VRELLGLTRKRSPDHAVAEQWIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD
NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLDLWPI

Sequences:

>Translated_304_residues
MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAVYDHLEWLMSPNVLPFPVHVV
SGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDEDDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRK
VRELLGLTRKRSPDHAVAEQWIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD
NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLDLWPI
>Mature_304_residues
MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAVYDHLEWLMSPNVLPFPVHVV
SGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDEDDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRK
VRELLGLTRKRSPDHAVAEQWIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD
NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLDLWPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33850; Mature: 33850

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAV
CEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH
YDHLEWLMSPNVLPFPVHVVSGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDE
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCHHHHHCCCCCCCCCCCCC
DDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRKVRELLGLTRKRSPDHAVAEQ
CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHH
WIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD
HCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEE
LWPI
ECCC
>Mature Secondary Structure
MLLVPNFTGDGASSPIRLRALSLGAGVQSTTMALMAAHGEIGPIPDCAIFADTGWEPKAV
CEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHH
YDHLEWLMSPNVLPFPVHVVSGGNILDNLMDAAAGKRWASIPAFAKTVTPAGSARPVLDE
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCHHHHHCCCCCCCCCCCCC
DDDGELVQIGSRATSRETVSIGMMRRACTADYKIVPIRRKVRELLGLTRKRSPDHAVAEQ
CCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHH
WIGISTDEASRIKPSFEDWQINRWPLIEQRMSRRDCLAWLRRHDYPTPPKSACIGCPFHD
HCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
NGRWRHMRDHDPEAWAEAVIVDRALRTGIRRIRGEVYLHRSCVPLDEADLSTAADHGQLD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEE
LWPI
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA