| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 16119862
Identifier: 16119862
GI number: 16119862
Start: 62881
End: 63597
Strand: Direct
Name: 16119862
Synonym: Atu6050
Alternate gene names: NA
Gene position: 62881-63597 (Clockwise)
Preceding gene: 16119859
Following gene: 16119863
Centisome position: 29.35
GC content: 60.11
Gene sequence:
>717_bases ATGGTTGCTGTCACCCGTAAATCGCAGATGCGCGCAAAGCTAGAAGTCAATCCGGCTGCGGTAGCCGATGTTCTCAAGGT TTTGGCCCGACACAATCCAGGCCTTTCAAAGCCGGCGCTTGCAGCGACTGGCAAGGTCATGGCCGTGGTCTCTGCGGTGG CAGCGCGCCTTTCTGTCGAGCAACAGCATCGGATTGCCGACGATGAAACGGAACTCGCCCATATTGTGGAAGCCGCCGTC GCCGAACTGGCTGCGAAGCCAGGTCATGTACTCGCGGAGGTATCGGTCGAAAAGCCTGTGGAGGTCAGCCGAGGTGCTGG TCTGGGGCAATCGGTAGACATGGAGGAAGGGCGCCGCAGGCTCGACGAATTTGCGACGCCAACCCGCATCGAAGACTGGG CCGGTCCGGTCGCTGGTCCGGGCGATATCGAGAAGAAGTTCGGCACGAAGCGATCGACCTTGCACGACTGGCACAAGCGC GGAGCTGTCGTCGGTCTGCTCAAGGGCGAGCGAAAGCATGTCTTTCCCCTGGCTCAGTTTGTCGATGGCCGGCCGGTCGA GGGCATGCCTCAGGTCACCAAAATCATCCGCAATCCGCGTGTGGCGTGGCAATGGCTGATCCAGCCGAAGCCGAGCATTG GCGGAACGCCGCTCGACAATCTCAAAATGGGCAATCTAGACGAAGTTCTGGATGCGGCCGAGCGCGATTTTGGTTGA
Upstream 100 bases:
>100_bases TAAGGGCCTCAGTGCTGGCCGCTCCCGAATCTGAGGGCAACAATCTGGACAAATCGGACAATCCGCATTATCTTGGCTGT AGTCAAGAAGGAAGACGAAG
Downstream 100 bases:
>100_bases GCTGAATCGTGAAACTTGATCCCCAAACGGTTCGGGAGCTCGCGCTTGCCTTTCTCCCGCAATCTTATGTCCGCATTATA CCTGTAGCCCACATGTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MVAVTRKSQMRAKLEVNPAAVADVLKVLARHNPGLSKPALAATGKVMAVVSAVAARLSVEQQHRIADDETELAHIVEAAV AELAAKPGHVLAEVSVEKPVEVSRGAGLGQSVDMEEGRRRLDEFATPTRIEDWAGPVAGPGDIEKKFGTKRSTLHDWHKR GAVVGLLKGERKHVFPLAQFVDGRPVEGMPQVTKIIRNPRVAWQWLIQPKPSIGGTPLDNLKMGNLDEVLDAAERDFG
Sequences:
>Translated_238_residues MVAVTRKSQMRAKLEVNPAAVADVLKVLARHNPGLSKPALAATGKVMAVVSAVAARLSVEQQHRIADDETELAHIVEAAV AELAAKPGHVLAEVSVEKPVEVSRGAGLGQSVDMEEGRRRLDEFATPTRIEDWAGPVAGPGDIEKKFGTKRSTLHDWHKR GAVVGLLKGERKHVFPLAQFVDGRPVEGMPQVTKIIRNPRVAWQWLIQPKPSIGGTPLDNLKMGNLDEVLDAAERDFG >Mature_238_residues MVAVTRKSQMRAKLEVNPAAVADVLKVLARHNPGLSKPALAATGKVMAVVSAVAARLSVEQQHRIADDETELAHIVEAAV AELAAKPGHVLAEVSVEKPVEVSRGAGLGQSVDMEEGRRRLDEFATPTRIEDWAGPVAGPGDIEKKFGTKRSTLHDWHKR GAVVGLLKGERKHVFPLAQFVDGRPVEGMPQVTKIIRNPRVAWQWLIQPKPSIGGTPLDNLKMGNLDEVLDAAERDFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25736; Mature: 25736
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVTRKSQMRAKLEVNPAAVADVLKVLARHNPGLSKPALAATGKVMAVVSAVAARLSVE CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QQHRIADDETELAHIVEAAVAELAAKPGHVLAEVSVEKPVEVSRGAGLGQSVDMEEGRRR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHH LDEFATPTRIEDWAGPVAGPGDIEKKFGTKRSTLHDWHKRGAVVGLLKGERKHVFPLAQF HHHHCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHH VDGRPVEGMPQVTKIIRNPRVAWQWLIQPKPSIGGTPLDNLKMGNLDEVLDAAERDFG HCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MVAVTRKSQMRAKLEVNPAAVADVLKVLARHNPGLSKPALAATGKVMAVVSAVAARLSVE CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QQHRIADDETELAHIVEAAVAELAAKPGHVLAEVSVEKPVEVSRGAGLGQSVDMEEGRRR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHH LDEFATPTRIEDWAGPVAGPGDIEKKFGTKRSTLHDWHKRGAVVGLLKGERKHVFPLAQF HHHHCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHH VDGRPVEGMPQVTKIIRNPRVAWQWLIQPKPSIGGTPLDNLKMGNLDEVLDAAERDFG HCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA