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The map label for this gene is repB

Identifier: 16119856

GI number: 16119856

Start: 53578

End: 54690

Strand: Direct

Name: repB

Synonym: Atu6044

Alternate gene names: NA

Gene position: 53578-54690 (Clockwise)

Preceding gene: 159161958

Following gene: 16119857

Centisome position: 25.01

GC content: 56.69

Gene sequence:

>1113_bases
TTGGCCAGGGTGCAGTTGTCTTGTCTTGTTGGGAGCTCCCAACCAAGCGCATTTGCAATCAAAAATGCGACGCCACGACG
CCAAACCCAAGAGGCCGATATCATGAGCCGCAAAGACGCAATCGATACTTTGTTCCTCAAGAAGCAACCTGCGACCGATA
GAGCAGCAGTCGACAAGTCGACCGCTCGTGTTCGTACCGGAGCGATTTCGGCCATGGGTTCGTCTTTGCAAGAGATGGCT
GAGGGCGCAAAGGCTGCAGCTCGGCTGCAGGATCAACTGGCTACAGGCGAAGCCGTCGTGTCCCTGGATCCATCCATGAT
CGACGGGTCGCCGATCGCGGATCGGCTGCCCTCAGACGTGGATCCGAAATTCGAGCAGCTTGAGGCGAGCATTTCGCAGG
AGGGGCAGCAGGTGCCGGTTCTTGTCAGACCGCACCCTGAGGCTGCCGGTCGATATCAGATCGTATATGGAAGGCGGCGG
CTGCGCGCGGCAGTAAATCTGCGGAGAGAGGTTTCTGCCATTGTTCGAAATCTCACGGACTGTGAACTGGTCGTGGCCCA
GGGCCGCGAAAATCTTAACCGCGCTGACCTCTCGTTCATTGAGAAGGCTCTCTTCGCCCTGCGCCTCGAAGATGCGGGTT
TTGATAGAGCCACCATCATTGCCGCGCTATCCACTGACAAGGCCGACCTCAGCCGCTACATAACTGTAGCAAGGGGCATA
CCGCTGAACCTCGCCACACAAATCGGCCCAGCGTCGAAAGCGGGTCGATCGCGTTGGGTCGTACTTGCCGAGGGGCTTGG
GAAGCCTAAGGCAACGGACGCAATCGAAGCGATGCTTGGGTCAGAGCAGTTCAAGCAATCTGATAGCGATACCCGCTTTA
ACCTCATTTTCAACGCCGTTTCAAGGCCACCTGCGAAGACTCCAAAAAAGGTAAGGGCCTGGAGCACGCCAAAGGGGAAA
AAGGCAGCGACGATCCGACAAGAAACTGGACGAACGGCGCTGGTTTTCGACGAGAGACTGGTGCCAACTTTTGGCGAATA
TGTCGCTGACCAGTTGGACAGTCTGTACGCCCAGTTCATTGAAACCAACGGAGGAGGCAAGCTCGACCAATAG

Upstream 100 bases:

>100_bases
TGTTGGGAGCTCCCAACAGACAGGTGTTGATTCGCCCCCTGGACATGGGGCACTGGAGAAGCCGGGGTAATTTGAGACGA
CGACGCACGCCCATCGCTAA

Downstream 100 bases:

>100_bases
TCAGGGTTTCATCCAATTTAAAGCTCCGCTCGACTGAGATGGACTGGCTCTCACCGCAAAAGAAAAAGGCCCCCGAAACG
GCGTTCCGGAAGACCTTCTC

Product: plasmid partitioning protein RepB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MARVQLSCLVGSSQPSAFAIKNATPRRQTQEADIMSRKDAIDTLFLKKQPATDRAAVDKSTARVRTGAISAMGSSLQEMA
EGAKAAARLQDQLATGEAVVSLDPSMIDGSPIADRLPSDVDPKFEQLEASISQEGQQVPVLVRPHPEAAGRYQIVYGRRR
LRAAVNLRREVSAIVRNLTDCELVVAQGRENLNRADLSFIEKALFALRLEDAGFDRATIIAALSTDKADLSRYITVARGI
PLNLATQIGPASKAGRSRWVVLAEGLGKPKATDAIEAMLGSEQFKQSDSDTRFNLIFNAVSRPPAKTPKKVRAWSTPKGK
KAATIRQETGRTALVFDERLVPTFGEYVADQLDSLYAQFIETNGGGKLDQ

Sequences:

>Translated_370_residues
MARVQLSCLVGSSQPSAFAIKNATPRRQTQEADIMSRKDAIDTLFLKKQPATDRAAVDKSTARVRTGAISAMGSSLQEMA
EGAKAAARLQDQLATGEAVVSLDPSMIDGSPIADRLPSDVDPKFEQLEASISQEGQQVPVLVRPHPEAAGRYQIVYGRRR
LRAAVNLRREVSAIVRNLTDCELVVAQGRENLNRADLSFIEKALFALRLEDAGFDRATIIAALSTDKADLSRYITVARGI
PLNLATQIGPASKAGRSRWVVLAEGLGKPKATDAIEAMLGSEQFKQSDSDTRFNLIFNAVSRPPAKTPKKVRAWSTPKGK
KAATIRQETGRTALVFDERLVPTFGEYVADQLDSLYAQFIETNGGGKLDQ
>Mature_369_residues
ARVQLSCLVGSSQPSAFAIKNATPRRQTQEADIMSRKDAIDTLFLKKQPATDRAAVDKSTARVRTGAISAMGSSLQEMAE
GAKAAARLQDQLATGEAVVSLDPSMIDGSPIADRLPSDVDPKFEQLEASISQEGQQVPVLVRPHPEAAGRYQIVYGRRRL
RAAVNLRREVSAIVRNLTDCELVVAQGRENLNRADLSFIEKALFALRLEDAGFDRATIIAALSTDKADLSRYITVARGIP
LNLATQIGPASKAGRSRWVVLAEGLGKPKATDAIEAMLGSEQFKQSDSDTRFNLIFNAVSRPPAKTPKKVRAWSTPKGKK
AATIRQETGRTALVFDERLVPTFGEYVADQLDSLYAQFIETNGGGKLDQ

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR017819
- InterPro:   IPR011111 [H]

Pfam domain/function: PF02195 ParBc; PF07506 RepB [H]

EC number: NA

Molecular weight: Translated: 40150; Mature: 40019

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVQLSCLVGSSQPSAFAIKNATPRRQTQEADIMSRKDAIDTLFLKKQPATDRAAVDKS
CCEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCH
TARVRTGAISAMGSSLQEMAEGAKAAARLQDQLATGEAVVSLDPSMIDGSPIADRLPSDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCC
DPKFEQLEASISQEGQQVPVLVRPHPEAAGRYQIVYGRRRLRAAVNLRREVSAIVRNLTD
CHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH
CELVVAQGRENLNRADLSFIEKALFALRLEDAGFDRATIIAALSTDKADLSRYITVARGI
HHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCC
PLNLATQIGPASKAGRSRWVVLAEGLGKPKATDAIEAMLGSEQFKQSDSDTRFNLIFNAV
CCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHCCCCCCEEEEEEEHH
SRPPAKTPKKVRAWSTPKGKKAATIRQETGRTALVFDERLVPTFGEYVADQLDSLYAQFI
CCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
ETNGGGKLDQ
HCCCCCCCCC
>Mature Secondary Structure 
ARVQLSCLVGSSQPSAFAIKNATPRRQTQEADIMSRKDAIDTLFLKKQPATDRAAVDKS
CEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCH
TARVRTGAISAMGSSLQEMAEGAKAAARLQDQLATGEAVVSLDPSMIDGSPIADRLPSDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCC
DPKFEQLEASISQEGQQVPVLVRPHPEAAGRYQIVYGRRRLRAAVNLRREVSAIVRNLTD
CHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH
CELVVAQGRENLNRADLSFIEKALFALRLEDAGFDRATIIAALSTDKADLSRYITVARGI
HHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCC
PLNLATQIGPASKAGRSRWVVLAEGLGKPKATDAIEAMLGSEQFKQSDSDTRFNLIFNAV
CCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHCCCCCCEEEEEEEHH
SRPPAKTPKKVRAWSTPKGKKAATIRQETGRTALVFDERLVPTFGEYVADQLDSLYAQFI
CCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
ETNGGGKLDQ
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]