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The map label for this gene is ycgA [H]

Identifier: 160903320

GI number: 160903320

Start: 2092021

End: 2093415

Strand: Direct

Name: ycgA [H]

Synonym: Pmob_1891

Alternate gene names: 160903320

Gene position: 2092021-2093415 (Clockwise)

Preceding gene: 160903319

Following gene: 160903321

Centisome position: 96.43

GC content: 33.12

Gene sequence:

>1395_bases
ATGGAAAAGTCTGTAAAAATAAGCAGAAATATGTTTATAACCTCAGCACTAGTTATTTTTTCTATCATGATGATCTCAGG
GGTATTAACAATTTTATTGCCTGCGGGGGAGTATCAAAGAGAGTTTATAGATGGAAGAACAGTCATCGTAGAAGATTCTT
ACCAGACAATAGAAAAACCAAATTATCCCTTTTGGCGATGGTTTACCGCTCCAATCGAAGTATTATGGAGCTCTGATGCA
CCCCTTATAATCACTATTATTGTGTTTATATTGGTAGTTTCCGGTTCGATCTATATTTTGAACAAAAACCATGTCATCGA
ATACATCATTAATAAAATTGTTAAAAGGTACAGCAAGCAAAAAAACGTTTTATTAGGTTTGATGATTCTAGTTTTTATGC
TTTTAGGTGCATTGATGGGGATTTTTGAAGAAATTGTCCCTTTAATACCGATTGTAATAATGTTTTCAGTTTCCTTGGGT
TGGGATGACCTAACAGGTTTGGGGATGAGTTTACTCGCAGCAGGATTTGGTTTTTCTGCAGCAATAGCGAATCCGTTCAG
TTTAGGGGTGGCACAAAGAATAGCTGAAATCCCACTTTTTTCGGGAATAGGTCTCAGAATAATTATTTTTATCACTACTT
ACCTACTTTTATTCTTTTTTTTGAGGAATTATGCTAAGAAGCACCAAAAAGAGGTTGTTGATCAGCAAATAGAAACCATC
GATTATGATGTAAATACTTCAAAAGCTTCTAAAATTTTAATAACAATAATTTCAATTTTGTTTATACTGATTTTAATTTC
TGGTTTTACTGGATTTATGAGTGGTCTTATGTTGCCCGTTGTTGGTGTGTTATTCATGGTAGGAGGTTTTTTATCGGGTT
TGGTTGTTGAAAAAAGTATTTCTAAAGTATTCAAAGATTTTTTAATAGGGATGAGCAATCTGTTGCCTGGAGTCATATTG
ATTCTCATGGCTATGTCGGTAAAACTGATAATTACCAATGGAAAAATCTTAGATACGATATTGTACAATGCATCTATTGT
TATATCTGAATCTGGAACTGTCGCTGCAACTTTTTTGATTTATTTGCTTTTTTTTATTATGAATTTATTTATAGGTTCAG
CTTCAGCAAAAGCATTTTTGACTATGCCAATTGTAGTTCCTTTGGCAGATTTGGTTGGAATCACTAGACAAACCGCTGTA
CAAGCTTTCGTTTTTGGAGATGGGTTTAGTAATTTGTTGTATCCAACTAATGCAGTGTTGTTAATTTCGTTGGGAATTGC
TGGAGTTAGTTATTTAAAATGGTTTAAATTCATTTGGAAGATTCAGCTTGCTGTGTTTATTCTTTCTTTGCTATATTTGT
ATATTGCAGTAAAAATAGGATACGGTCCTATATAA

Upstream 100 bases:

>100_bases
CCAGAAGCCTATATAGAAGGTGGCGCTGGAAAGGTTGTTGAAATTTAAAAATACTAAAGACAATAAAATATCAAAACATA
TTATACAAGGGGGATGAGGT

Downstream 100 bases:

>100_bases
TAGGAGATAGAGAGATGTATGATTATTCCTATGATTATGATGAGTGTAGAAAAAACTTTTACACCTTTGAAAATGAGCTA
AAGAAATATTATTCTACAGT

Product: C4-dicarboxylate anaerobic carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MEKSVKISRNMFITSALVIFSIMMISGVLTILLPAGEYQREFIDGRTVIVEDSYQTIEKPNYPFWRWFTAPIEVLWSSDA
PLIITIIVFILVVSGSIYILNKNHVIEYIINKIVKRYSKQKNVLLGLMILVFMLLGALMGIFEEIVPLIPIVIMFSVSLG
WDDLTGLGMSLLAAGFGFSAAIANPFSLGVAQRIAEIPLFSGIGLRIIIFITTYLLLFFFLRNYAKKHQKEVVDQQIETI
DYDVNTSKASKILITIISILFILILISGFTGFMSGLMLPVVGVLFMVGGFLSGLVVEKSISKVFKDFLIGMSNLLPGVIL
ILMAMSVKLIITNGKILDTILYNASIVISESGTVAATFLIYLLFFIMNLFIGSASAKAFLTMPIVVPLADLVGITRQTAV
QAFVFGDGFSNLLYPTNAVLLISLGIAGVSYLKWFKFIWKIQLAVFILSLLYLYIAVKIGYGPI

Sequences:

>Translated_464_residues
MEKSVKISRNMFITSALVIFSIMMISGVLTILLPAGEYQREFIDGRTVIVEDSYQTIEKPNYPFWRWFTAPIEVLWSSDA
PLIITIIVFILVVSGSIYILNKNHVIEYIINKIVKRYSKQKNVLLGLMILVFMLLGALMGIFEEIVPLIPIVIMFSVSLG
WDDLTGLGMSLLAAGFGFSAAIANPFSLGVAQRIAEIPLFSGIGLRIIIFITTYLLLFFFLRNYAKKHQKEVVDQQIETI
DYDVNTSKASKILITIISILFILILISGFTGFMSGLMLPVVGVLFMVGGFLSGLVVEKSISKVFKDFLIGMSNLLPGVIL
ILMAMSVKLIITNGKILDTILYNASIVISESGTVAATFLIYLLFFIMNLFIGSASAKAFLTMPIVVPLADLVGITRQTAV
QAFVFGDGFSNLLYPTNAVLLISLGIAGVSYLKWFKFIWKIQLAVFILSLLYLYIAVKIGYGPI
>Mature_464_residues
MEKSVKISRNMFITSALVIFSIMMISGVLTILLPAGEYQREFIDGRTVIVEDSYQTIEKPNYPFWRWFTAPIEVLWSSDA
PLIITIIVFILVVSGSIYILNKNHVIEYIINKIVKRYSKQKNVLLGLMILVFMLLGALMGIFEEIVPLIPIVIMFSVSLG
WDDLTGLGMSLLAAGFGFSAAIANPFSLGVAQRIAEIPLFSGIGLRIIIFITTYLLLFFFLRNYAKKHQKEVVDQQIETI
DYDVNTSKASKILITIISILFILILISGFTGFMSGLMLPVVGVLFMVGGFLSGLVVEKSISKVFKDFLIGMSNLLPGVIL
ILMAMSVKLIITNGKILDTILYNASIVISESGTVAATFLIYLLFFIMNLFIGSASAKAFLTMPIVVPLADLVGITRQTAV
QAFVFGDGFSNLLYPTNAVLLISLGIAGVSYLKWFKFIWKIQLAVFILSLLYLYIAVKIGYGPI

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=508, Percent_Identity=27.755905511811, Blast_Score=166, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51372; Mature: 51372

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSVKISRNMFITSALVIFSIMMISGVLTILLPAGEYQREFIDGRTVIVEDSYQTIEKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCHHHHCCC
NYPFWRWFTAPIEVLWSSDAPLIITIIVFILVVSGSIYILNKNHVIEYIINKIVKRYSKQ
CCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH
KNVLLGLMILVFMLLGALMGIFEEIVPLIPIVIMFSVSLGWDDLTGLGMSLLAAGFGFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH
AIANPFSLGVAQRIAEIPLFSGIGLRIIIFITTYLLLFFFLRNYAKKHQKEVVDQQIETI
HHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYDVNTSKASKILITIISILFILILISGFTGFMSGLMLPVVGVLFMVGGFLSGLVVEKSI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKVFKDFLIGMSNLLPGVILILMAMSVKLIITNGKILDTILYNASIVISESGTVAATFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCEEEEECCCCHHHHHHH
YLLFFIMNLFIGSASAKAFLTMPIVVPLADLVGITRQTAVQAFVFGDGFSNLLYPTNAVL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHH
LISLGIAGVSYLKWFKFIWKIQLAVFILSLLYLYIAVKIGYGPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEKSVKISRNMFITSALVIFSIMMISGVLTILLPAGEYQREFIDGRTVIVEDSYQTIEKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCHHHHCCC
NYPFWRWFTAPIEVLWSSDAPLIITIIVFILVVSGSIYILNKNHVIEYIINKIVKRYSKQ
CCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH
KNVLLGLMILVFMLLGALMGIFEEIVPLIPIVIMFSVSLGWDDLTGLGMSLLAAGFGFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH
AIANPFSLGVAQRIAEIPLFSGIGLRIIIFITTYLLLFFFLRNYAKKHQKEVVDQQIETI
HHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYDVNTSKASKILITIISILFILILISGFTGFMSGLMLPVVGVLFMVGGFLSGLVVEKSI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKVFKDFLIGMSNLLPGVILILMAMSVKLIITNGKILDTILYNASIVISESGTVAATFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCEEEEECCCCHHHHHHH
YLLFFIMNLFIGSASAKAFLTMPIVVPLADLVGITRQTAVQAFVFGDGFSNLLYPTNAVL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHH
LISLGIAGVSYLKWFKFIWKIQLAVFILSLLYLYIAVKIGYGPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]