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The map label for this gene is rpmF

Identifier: 160903275

GI number: 160903275

Start: 2029229

End: 2029411

Strand: Direct

Name: rpmF

Synonym: Pmob_1844

Alternate gene names: 160903275

Gene position: 2029229-2029411 (Clockwise)

Preceding gene: 160903274

Following gene: 160903276

Centisome position: 93.53

GC content: 39.34

Gene sequence:

>183_bases
ATGGCAACGCCAAAACAAAAGGCTTCAAGAGGTCAAACACATTCTAGAAGAGCGAAATTTTACTCTGCCTACAAGATCAA
TGTTGTAAAATGTCCGAAGTGCGGAGAGCCAAAATTACCACACCGCGTTTGTTTGAATTGTGGATACTATGGTGACAAAC
AAATCTTAGAAATAGGTGAATGA

Upstream 100 bases:

>100_bases
TTGTGAAACAGAGGATATTGACCCACGTTTTGTAATGCTAAAAAAGTTGTTGGATAATGAAAAATCAAATTAATACAAAA
TACCAAAGGGGGAAACATAC

Downstream 100 bases:

>100_bases
GCCTATGAATAGTGTAAAAATAGGTATCGATCTATACGGCGGTGATAATGCGCCCAGTTCTGTTGTTGAGGGCGCACTTT
TTGCTTTAAAGAATAAGTTC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MATPKQKASRGQTHSRRAKFYSAYKINVVKCPKCGEPKLPHRVCLNCGYYGDKQILEIGE

Sequences:

>Translated_60_residues
MATPKQKASRGQTHSRRAKFYSAYKINVVKCPKCGEPKLPHRVCLNCGYYGDKQILEIGE
>Mature_59_residues
ATPKQKASRGQTHSRRAKFYSAYKINVVKCPKCGEPKLPHRVCLNCGYYGDKQILEIGE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_PETMO (A9BGV2)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001568856.1
- ProteinModelPortal:   A9BGV2
- SMR:   A9BGV2
- GeneID:   5758032
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_1844
- HOGENOM:   HBG728381
- OMA:   YGKKQVF
- ProtClustDB:   PRK12286
- BioCyc:   PMOB403833:PMOB_1844-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6799; Mature: 6668

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPKQKASRGQTHSRRAKFYSAYKINVVKCPKCGEPKLPHRVCLNCGYYGDKQILEIGE
CCCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCCCCCCCHHEEEECCCCCCCEEEEECC
>Mature Secondary Structure 
ATPKQKASRGQTHSRRAKFYSAYKINVVKCPKCGEPKLPHRVCLNCGYYGDKQILEIGE
CCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCCCCCCCHHEEEECCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA