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The map label for this gene is rpmB

Identifier: 160903264

GI number: 160903264

Start: 2018129

End: 2018320

Strand: Direct

Name: rpmB

Synonym: Pmob_1833

Alternate gene names: 160903264

Gene position: 2018129-2018320 (Clockwise)

Preceding gene: 160903263

Following gene: 160903273

Centisome position: 93.02

GC content: 35.42

Gene sequence:

>192_bases
ATGGCAAGAAAATGTGAAATTTGCGGAAAAAGTCCTGCAACCGGAAACACCGTTGCTAAATCAAAAGTAACAACAAGAAG
GGTATGGAAGCCCAATCTTCAAAAGATAAGAGTAGTAACAGACGAAGGTACAGTAAGAAGAATGTATGTTTGTACGAAAT
GTTTAAAATCAGGAAAAGTTCAAAAAGCTTAA

Upstream 100 bases:

>100_bases
GAATTCTTAGTAAGGAAAATTGTTTTTGCCTTCATAAAAAAGTTATAAAATTTCCAAATTTCTAAAAACAGAAAAAAGTA
TAGGCTAAGGAGGAATATAG

Downstream 100 bases:

>100_bases
GTAAAAAATCGGTCTAAAATAAGACCGATTTAATTTTACATAATTTGGCGTGCCTGGCCGGATTTGAACCGGCAACCTCC
GGATCCGCAGTCCAACGCTC

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MARKCEICGKSPATGNTVAKSKVTTRRVWKPNLQKIRVVTDEGTVRRMYVCTKCLKSGKVQKA

Sequences:

>Translated_63_residues
MARKCEICGKSPATGNTVAKSKVTTRRVWKPNLQKIRVVTDEGTVRRMYVCTKCLKSGKVQKA
>Mature_62_residues
ARKCEICGKSPATGNTVAKSKVTTRRVWKPNLQKIRVVTDEGTVRRMYVCTKCLKSGKVQKA

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_PETMO (A9BGU1)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001568845.1
- ProteinModelPortal:   A9BGU1
- SMR:   A9BGU1
- GeneID:   5758042
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_1833
- HOGENOM:   HBG597003
- OMA:   NACTSCI
- BioCyc:   PMOB403833:PMOB_1833-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 7041; Mature: 6909

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKCEICGKSPATGNTVAKSKVTTRRVWKPNLQKIRVVTDEGTVRRMYVCTKCLKSGKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
QKA
CCC
>Mature Secondary Structure 
ARKCEICGKSPATGNTVAKSKVTTRRVWKPNLQKIRVVTDEGTVRRMYVCTKCLKSGKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCC
QKA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA