| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
Click here to switch to the map view.
The map label for this gene is 160903041
Identifier: 160903041
GI number: 160903041
Start: 1748431
End: 1749399
Strand: Direct
Name: 160903041
Synonym: Pmob_1605
Alternate gene names: NA
Gene position: 1748431-1749399 (Clockwise)
Preceding gene: 160903040
Following gene: 160903042
Centisome position: 80.59
GC content: 31.06
Gene sequence:
>969_bases ATGAATACAAATTATTTTGAAATAATTCCTAAGATTATACCGGTTTTCATCTTGTTAAGCGTTGGATATTTTTTAAAAAT CAAGAAGTTTATCTCTAGCAATTCTATTAGTGAGATCAAGAAATTGATCGTTAACATTTCACTTCCTGCACTATTATTCA TATCGTTTCTGGATGTTAATTTAACTATAGAGTTCTTTTTTGTCATTCTAATTGTTTTTTTGATCAATCTTTTGATGTTA TTAATAGGTAAGGGTTTTGCATTTTTTACAAAGTTAAAGGATCCTCACTTACCTTTGCTTTTCACCGGTTTTGAAGTTGG TATGCTTGGCATACCCCTCTTTGGAGCAATATACGGTACGGAAAGCATTAAATATATGGCTGTGGTTGATCTTGGCCAGG AGATATACGTTTGGTTTGTATTATTTGCTATGTTATTGAGCCTTCAACAAAAAGAAAAGCGACTGCATTTTGTAGGGTTA TTTAAATCTTTTATCACTTCTCCGATAATTATAGCTATTTTACTTGGGATCATTATCAATTCTAGCGGGATAAAATCTTT AATTAGTGAAAATTTCCTATTTCAAGGTGTTATTAACAGTATCGATATGCTTGGGAGTTTAACAGTGCCTTTAATACTAT TAGTGATAGGATACGAAATTAATTTTAAAACCAGTAATATGAGTTTACCTTTAAAAATTATTGGCGTTAGACTGTTAATA TTAGTACCTATTGCTCTTTTAGTTGGGAATTTTGTTTTTAATAAATTTCTTGAACTCGAACCCCTTTACAGCGTTGCTCT ACTGTCGGTTGTAGTATTGCCTCCCCCTTTTATTATTCCTCTCTTTTTTAATCAAGAAGATGAACAAAGGGGTGAGAAAA GTTATGTATATAACACCTTGTCAATAAGCACAGTTATATCTATAATAGCTTTTTTAATCACTGCTGTATTTTTCACACCT ACTCTTTGA
Upstream 100 bases:
>100_bases AAATATTTGAAGATGATTTTAAATTATGAGATAAGTAGAAGAAAATTTATTGGTTCCTGCTAAATTTTTTACAAACTAAA ATTCGAAAGGACATTATACA
Downstream 100 bases:
>100_bases ATAATCTGAAAAATATACAAGAATTAAAAAAACCAGTCATTGAAATATTCTCAGGAGGTAATCCCATGCGAAAACCAACG ATAAAAGACATTCCAAAGTC
Product: auxin efflux carrier
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MNTNYFEIIPKIIPVFILLSVGYFLKIKKFISSNSISEIKKLIVNISLPALLFISFLDVNLTIEFFFVILIVFLINLLML LIGKGFAFFTKLKDPHLPLLFTGFEVGMLGIPLFGAIYGTESIKYMAVVDLGQEIYVWFVLFAMLLSLQQKEKRLHFVGL FKSFITSPIIIAILLGIIINSSGIKSLISENFLFQGVINSIDMLGSLTVPLILLVIGYEINFKTSNMSLPLKIIGVRLLI LVPIALLVGNFVFNKFLELEPLYSVALLSVVVLPPPFIIPLFFNQEDEQRGEKSYVYNTLSISTVISIIAFLITAVFFTP TL
Sequences:
>Translated_322_residues MNTNYFEIIPKIIPVFILLSVGYFLKIKKFISSNSISEIKKLIVNISLPALLFISFLDVNLTIEFFFVILIVFLINLLML LIGKGFAFFTKLKDPHLPLLFTGFEVGMLGIPLFGAIYGTESIKYMAVVDLGQEIYVWFVLFAMLLSLQQKEKRLHFVGL FKSFITSPIIIAILLGIIINSSGIKSLISENFLFQGVINSIDMLGSLTVPLILLVIGYEINFKTSNMSLPLKIIGVRLLI LVPIALLVGNFVFNKFLELEPLYSVALLSVVVLPPPFIIPLFFNQEDEQRGEKSYVYNTLSISTVISIIAFLITAVFFTP TL >Mature_322_residues MNTNYFEIIPKIIPVFILLSVGYFLKIKKFISSNSISEIKKLIVNISLPALLFISFLDVNLTIEFFFVILIVFLINLLML LIGKGFAFFTKLKDPHLPLLFTGFEVGMLGIPLFGAIYGTESIKYMAVVDLGQEIYVWFVLFAMLLSLQQKEKRLHFVGL FKSFITSPIIIAILLGIIINSSGIKSLISENFLFQGVINSIDMLGSLTVPLILLVIGYEINFKTSNMSLPLKIIGVRLLI LVPIALLVGNFVFNKFLELEPLYSVALLSVVVLPPPFIIPLFFNQEDEQRGEKSYVYNTLSISTVISIIAFLITAVFFTP TL
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36151; Mature: 36151
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNYFEIIPKIIPVFILLSVGYFLKIKKFISSNSISEIKKLIVNISLPALLFISFLDVN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHH LTIEFFFVILIVFLINLLMLLIGKGFAFFTKLKDPHLPLLFTGFEVGMLGIPLFGAIYGT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCC ESIKYMAVVDLGQEIYVWFVLFAMLLSLQQKEKRLHFVGLFKSFITSPIIIAILLGIIIN CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSGIKSLISENFLFQGVINSIDMLGSLTVPLILLVIGYEINFKTSNMSLPLKIIGVRLLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH LVPIALLVGNFVFNKFLELEPLYSVALLSVVVLPPPFIIPLFFNQEDEQRGEKSYVYNTL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHHHH SISTVISIIAFLITAVFFTPTL HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTNYFEIIPKIIPVFILLSVGYFLKIKKFISSNSISEIKKLIVNISLPALLFISFLDVN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHH LTIEFFFVILIVFLINLLMLLIGKGFAFFTKLKDPHLPLLFTGFEVGMLGIPLFGAIYGT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHCC ESIKYMAVVDLGQEIYVWFVLFAMLLSLQQKEKRLHFVGLFKSFITSPIIIAILLGIIIN CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSGIKSLISENFLFQGVINSIDMLGSLTVPLILLVIGYEINFKTSNMSLPLKIIGVRLLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHH LVPIALLVGNFVFNKFLELEPLYSVALLSVVVLPPPFIIPLFFNQEDEQRGEKSYVYNTL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHHHH SISTVISIIAFLITAVFFTPTL HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA