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The map label for this gene is ygeA [C]

Identifier: 160903011

GI number: 160903011

Start: 1713080

End: 1713790

Strand: Direct

Name: ygeA [C]

Synonym: Pmob_1573

Alternate gene names: 160903011

Gene position: 1713080-1713790 (Clockwise)

Preceding gene: 160903004

Following gene: 160903012

Centisome position: 78.96

GC content: 34.18

Gene sequence:

>711_bases
ATGAAGAATGAGACTATAAAGTATCCAAAAAAAATTTTAGGGATTTTGGGAGGTATGGGGCCGGCAGCCACCGCTGAATT
CGTTAACATTTTGATCAGACAATTTCCTGCACCTTGTGATCAAGAATATCCAAAGATTATTTTATTTTCAAATCCACAAA
TCCCTGATCGAAACAAAGCTATATTGGAAAACGGCCAAGATCCTACTCCATACTTAAAAGAAGGTCTTCTTACTTTAAAG
AAATGGGGCGCAGATTTTTTGGCAATCCCGTGTAATACTGCCCATTATTTTATTGATTCGTTTATTAGTGAGATCGACAT
TCCTTTAGTTCACATTGTTGAAGCAACGATAAAAAAAGCAAAAATTTTTTCTCCTGAAGGGGCATGGGTTCTTTCAACTC
TAGCAACTAAAAAAACTGAATTATATGGAAAATACGCTAAAAAAGAAAACTACAACTTATTTCATCCTGATTGGGACTTT
ATGAAAAAAATTCAAAGAGTTATTGATATGGTGAAAATGGGAAATATTGAAGAAAGTGCAAAAGATTTAAAGCCATTATT
AGAAAATTTATGGAAAGCAAAAAATGTTCCAATAATAGCAGGTTGTACCGAACTACCTATTGCCTACAAAGCAACTAAAT
TACCTAAGGATCTTATAATTTCAAGTTTGGAAGCTTTGGCTGAGGAGTGCATCGAGGAGGTTTTGAAGTAG

Upstream 100 bases:

>100_bases
TAAGAACAAAATATGCTTTTTTTAATATTTTATAACTTGGATTCCATATGATAGGGGCAATATAACCCTATGAAATAAAA
ACCTTTAAAGTGTGGTTAAA

Downstream 100 bases:

>100_bases
AAGGAGATACACAATAATTCTTTCGGACAAACCTGGTTTAGGAATAGAAATCAATATGTGAAAGGCGGGGAGAGAACTTT
GAACGATAACAATTTAGGTT

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKNETIKYPKKILGILGGMGPAATAEFVNILIRQFPAPCDQEYPKIILFSNPQIPDRNKAILENGQDPTPYLKEGLLTLK
KWGADFLAIPCNTAHYFIDSFISEIDIPLVHIVEATIKKAKIFSPEGAWVLSTLATKKTELYGKYAKKENYNLFHPDWDF
MKKIQRVIDMVKMGNIEESAKDLKPLLENLWKAKNVPIIAGCTELPIAYKATKLPKDLIISSLEALAEECIEEVLK

Sequences:

>Translated_236_residues
MKNETIKYPKKILGILGGMGPAATAEFVNILIRQFPAPCDQEYPKIILFSNPQIPDRNKAILENGQDPTPYLKEGLLTLK
KWGADFLAIPCNTAHYFIDSFISEIDIPLVHIVEATIKKAKIFSPEGAWVLSTLATKKTELYGKYAKKENYNLFHPDWDF
MKKIQRVIDMVKMGNIEESAKDLKPLLENLWKAKNVPIIAGCTELPIAYKATKLPKDLIISSLEALAEECIEEVLK
>Mature_236_residues
MKNETIKYPKKILGILGGMGPAATAEFVNILIRQFPAPCDQEYPKIILFSNPQIPDRNKAILENGQDPTPYLKEGLLTLK
KWGADFLAIPCNTAHYFIDSFISEIDIPLVHIVEATIKKAKIFSPEGAWVLSTLATKKTELYGKYAKKENYNLFHPDWDF
MKKIQRVIDMVKMGNIEESAKDLKPLLENLWKAKNVPIIAGCTELPIAYKATKLPKDLIISSLEALAEECIEEVLK

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 26619; Mature: 26619

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNETIKYPKKILGILGGMGPAATAEFVNILIRQFPAPCDQEYPKIILFSNPQIPDRNKA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHH
ILENGQDPTPYLKEGLLTLKKWGADFLAIPCNTAHYFIDSFISEIDIPLVHIVEATIKKA
HHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KIFSPEGAWVLSTLATKKTELYGKYAKKENYNLFHPDWDFMKKIQRVIDMVKMGNIEESA
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
KDLKPLLENLWKAKNVPIIAGCTELPIAYKATKLPKDLIISSLEALAEECIEEVLK
HHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKNETIKYPKKILGILGGMGPAATAEFVNILIRQFPAPCDQEYPKIILFSNPQIPDRNKA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHH
ILENGQDPTPYLKEGLLTLKKWGADFLAIPCNTAHYFIDSFISEIDIPLVHIVEATIKKA
HHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KIFSPEGAWVLSTLATKKTELYGKYAKKENYNLFHPDWDFMKKIQRVIDMVKMGNIEESA
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
KDLKPLLENLWKAKNVPIIAGCTELPIAYKATKLPKDLIISSLEALAEECIEEVLK
HHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]