| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902939
Identifier: 160902939
GI number: 160902939
Start: 1611823
End: 1612869
Strand: Direct
Name: 160902939
Synonym: Pmob_1494
Alternate gene names: NA
Gene position: 1611823-1612869 (Clockwise)
Preceding gene: 160902932
Following gene: 160902940
Centisome position: 74.29
GC content: 33.14
Gene sequence:
>1047_bases TTGACTAATTTCAAAGAACAAGCTCATAAAATCTTAGAAGAAAGTCTTGTAATCGATGCACACTTTGATTTACTAATGGA TGTGGCAAATCAAAGGAAATATGGGATTCACAAAGTTATAGAAAACGATCATCTTGACAATTTTCGTAAAGGTGGATTAA ATGCCGTAGTTTCCTCTTTGTTTATCGAAAGTTTTTTAACCCCCGAAATCTCATTAAGAGAGGCTTTAGACCAAATCAGT TCATTTTACAAGGAATTAGAAGAATCAAGCGATTATTTAATGTTATGTAAATCCTACGAAGATATAATTAAAGCAAAAGA AAGTAATAAAATCGGAATATTTTTATCTTTTGAAGGAGTTGAACCTCTATACAACGATTTAGATTTACTCGATATCTTTT ACCGTTTAGGTGTGAGATTTGTCGGGCTGACTTGGAGTAGAAGGAACTACGCTGGTGATGGAAGCAAATTTCTACCGCCA GACCCCAAGAAAAACTCGAACGGTTTATCTGATTTTGGAATTGATTTAGTTAAAAAAGCTCAAAGCTTAGGTATGGTAAT AGATGTTAGCCATTTAAACGACAAAGGATTTTGGCAAGTTATCGAGCTTAGTAAAGGACCTATAATAGCTTCCCATTCTG ATTGTAGAAAGATAGTAAACTTAGAAAGAAACCTCTCTGATTCACAGATAAAGGCGATAGCAGATACCGATGGAGTAATA GGAATAAACGCCTATAACAAAATCGTATCGAATGATCCGGAAAAAGCCAATGTTGATGATTTAGTTAAACATATAGATCA TATTGTAAATTTAGTAGGTATTGAGTATGTTGGTTTAGGATTTGATTTCTGTGAGCACCTAAAAAAATTCAACCCCCAGT TTGTGAACGAACTTAATCCATCCCCATCTTTTCAAGTTTTAGATAACCATTCAAATATTGTATTACTCGTTGAGAAATTA CTACAAAGGGGATATGGTGAACAAGATATAAAGAAGATATTAGGAGAAAATTTTTCAAGGGTGTATAAAAAGGTACTAAT TCATTAG
Upstream 100 bases:
>100_bases GAATTAGAAAAAATTAGAAAAATAATAGTATAATTAAAAAACCTGATATCCCTACAACTGCAACCGCAAAAAAATAACAA AAGATCGAGGAGGAAATATT
Downstream 100 bases:
>100_bases AAATTTTAAATTAGTAAATTTGAAAAAATTTGGTAAAATAAGAAAGGGGGAAAGCTTTCAAACTCTGTAGATATTGATGT TATTTTTTGTGACTCTGATA
Product: membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTNFKEQAHKILEESLVIDAHFDLLMDVANQRKYGIHKVIENDHLDNFRKGGLNAVVSSLFIESFLTPEISLREALDQIS SFYKELEESSDYLMLCKSYEDIIKAKESNKIGIFLSFEGVEPLYNDLDLLDIFYRLGVRFVGLTWSRRNYAGDGSKFLPP DPKKNSNGLSDFGIDLVKKAQSLGMVIDVSHLNDKGFWQVIELSKGPIIASHSDCRKIVNLERNLSDSQIKAIADTDGVI GINAYNKIVSNDPEKANVDDLVKHIDHIVNLVGIEYVGLGFDFCEHLKKFNPQFVNELNPSPSFQVLDNHSNIVLLVEKL LQRGYGEQDIKKILGENFSRVYKKVLIH
Sequences:
>Translated_348_residues MTNFKEQAHKILEESLVIDAHFDLLMDVANQRKYGIHKVIENDHLDNFRKGGLNAVVSSLFIESFLTPEISLREALDQIS SFYKELEESSDYLMLCKSYEDIIKAKESNKIGIFLSFEGVEPLYNDLDLLDIFYRLGVRFVGLTWSRRNYAGDGSKFLPP DPKKNSNGLSDFGIDLVKKAQSLGMVIDVSHLNDKGFWQVIELSKGPIIASHSDCRKIVNLERNLSDSQIKAIADTDGVI GINAYNKIVSNDPEKANVDDLVKHIDHIVNLVGIEYVGLGFDFCEHLKKFNPQFVNELNPSPSFQVLDNHSNIVLLVEKL LQRGYGEQDIKKILGENFSRVYKKVLIH >Mature_347_residues TNFKEQAHKILEESLVIDAHFDLLMDVANQRKYGIHKVIENDHLDNFRKGGLNAVVSSLFIESFLTPEISLREALDQISS FYKELEESSDYLMLCKSYEDIIKAKESNKIGIFLSFEGVEPLYNDLDLLDIFYRLGVRFVGLTWSRRNYAGDGSKFLPPD PKKNSNGLSDFGIDLVKKAQSLGMVIDVSHLNDKGFWQVIELSKGPIIASHSDCRKIVNLERNLSDSQIKAIADTDGVIG INAYNKIVSNDPEKANVDDLVKHIDHIVNLVGIEYVGLGFDFCEHLKKFNPQFVNELNPSPSFQVLDNHSNIVLLVEKLL QRGYGEQDIKKILGENFSRVYKKVLIH
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=361, Percent_Identity=27.7008310249307, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI189458885, Length=350, Percent_Identity=26.5714285714286, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI4758190, Length=350, Percent_Identity=26.5714285714286, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI193211608, Length=356, Percent_Identity=25.2808988764045, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI193211610, Length=356, Percent_Identity=25.2808988764045, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI221475880, Length=328, Percent_Identity=28.6585365853659, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI281362638, Length=366, Percent_Identity=26.5027322404372, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI281362636, Length=366, Percent_Identity=26.5027322404372, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI161083233, Length=345, Percent_Identity=25.2173913043478, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 39464; Mature: 39332
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFKEQAHKILEESLVIDAHFDLLMDVANQRKYGIHKVIENDHLDNFRKGGLNAVVSSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH FIESFLTPEISLREALDQISSFYKELEESSDYLMLCKSYEDIIKAKESNKIGIFLSFEGV HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCC EPLYNDLDLLDIFYRLGVRFVGLTWSRRNYAGDGSKFLPPDPKKNSNGLSDFGIDLVKKA CHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH QSLGMVIDVSHLNDKGFWQVIELSKGPIIASHSDCRKIVNLERNLSDSQIKAIADTDGVI HHCCEEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHHHHHCCCCHHHHHEEECCCCEE GINAYNKIVSNDPEKANVDDLVKHIDHIVNLVGIEYVGLGFDFCEHLKKFNPQFVNELNP EEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCC SPSFQVLDNHSNIVLLVEKLLQRGYGEQDIKKILGENFSRVYKKVLIH CCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TNFKEQAHKILEESLVIDAHFDLLMDVANQRKYGIHKVIENDHLDNFRKGGLNAVVSSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH FIESFLTPEISLREALDQISSFYKELEESSDYLMLCKSYEDIIKAKESNKIGIFLSFEGV HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCC EPLYNDLDLLDIFYRLGVRFVGLTWSRRNYAGDGSKFLPPDPKKNSNGLSDFGIDLVKKA CHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH QSLGMVIDVSHLNDKGFWQVIELSKGPIIASHSDCRKIVNLERNLSDSQIKAIADTDGVI HHCCEEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHHHHHCCCCHHHHHEEECCCCEE GINAYNKIVSNDPEKANVDDLVKHIDHIVNLVGIEYVGLGFDFCEHLKKFNPQFVNELNP EEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCC SPSFQVLDNHSNIVLLVEKLLQRGYGEQDIKKILGENFSRVYKKVLIH CCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]