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The map label for this gene is apbE [H]

Identifier: 160902906

GI number: 160902906

Start: 1576020

End: 1577057

Strand: Direct

Name: apbE [H]

Synonym: Pmob_1461

Alternate gene names: 160902906

Gene position: 1576020-1577057 (Clockwise)

Preceding gene: 160902905

Following gene: 160902907

Centisome position: 72.64

GC content: 35.93

Gene sequence:

>1038_bases
TTGCGGCAGAAAAATATGCATAGTTTAAGAGTATATCTTTATATAGCTGCACTTGGTGTAGGAGTACTTTTGTTATCTTT
GTTGTTATTTTCTAAGCCGACCCCAGTTTACGAAGAAAAAGAGTTCCCAGTACTTGGCACTATTGTAAGGGTAAAAGTAG
CAGGGGATAAAGTATCTTCAAATGTTTTGTTGAATACAGCAGAACAAGAGTTGTACAGATTACACAACAAATTTAGTCCC
AACGTCGAAGGTAGTATAATCCAAAAATTAAATACTGACAGAAAGGTTGAAGTCGACGAAGAGGGATTATTTTTATTTCA
AGCTACCTACAATTATGCAGTAATAACAGGTGGGGCTTTCGACCCTACAGTGAGACCTTTACTTAAATTGTGGGGATTTG
ATGACATAAATTCTCCAAAAAAAGTTCCAATCCAAGAAGAAATCAATAGAACATTAGAAAACGTTGATTATAGATTCATA
AAAATTGATGAAGAAAAGAGAGAAATTTCTTTACTAAAAGATGGTGTCGAAGTAGACTTAGGAGGAATAGCTAAAGGATA
TGCAATTGATTTAGTTATACAAAAAATTAAGGAAATAGATCCTGGAGCTACAGGTTTTGTCGATGCGGGGGGAGATATTG
GAATAATAGGTCCAAAGTTTGGAGAACTTGCCTGGGTTATAGGGATAAGGGATCCTTTTTCACAAGATGCCTTAAAATCG
ATAGATACAATTTATTTAACAAGCGGTGCTGTTGCCACATCTGGAGATTACGAAAGATTTTTTATCGAAGACGGTAAAAA
ATATCATCATATATTAGATCCAGAAGATGGTTATCCTGCAGGAAACGCATCCAGTGTAACTGTTATAGCAGAAAAAGCGA
TGATAGCGGACGTCTTTTCTACGGCTCTTTTCGTTTTAGGATACGATAACCCTGCCTTAGATTATTTCACAGATTTTGGC
ATTCAAGCTTTGATTATATCTCCAACAGGGGAAAGTACTGAGACAAGTGGTTTTGACTATTTTCGGGAGAAAATGTGA

Upstream 100 bases:

>100_bases
ACGAAAATACTTATTGTCCAGATTGTGGAACACTCCTTATTCAAAGAAAAGGATACGACATAAAAATTGAAAATCTGAAT
GAAAACGGAGAGTGTAAAAA

Downstream 100 bases:

>100_bases
GAGTTTATGAAATTCACTAAGAAAAATGATCTGTACCTACTTTTAGTTGTAATATTGTTAGTTTTAGTAATGATTTTTAT
GAACGCTTTTCCTAAAAAGG

Product: ApbE family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRQKNMHSLRVYLYIAALGVGVLLLSLLLFSKPTPVYEEKEFPVLGTIVRVKVAGDKVSSNVLLNTAEQELYRLHNKFSP
NVEGSIIQKLNTDRKVEVDEEGLFLFQATYNYAVITGGAFDPTVRPLLKLWGFDDINSPKKVPIQEEINRTLENVDYRFI
KIDEEKREISLLKDGVEVDLGGIAKGYAIDLVIQKIKEIDPGATGFVDAGGDIGIIGPKFGELAWVIGIRDPFSQDALKS
IDTIYLTSGAVATSGDYERFFIEDGKKYHHILDPEDGYPAGNASSVTVIAEKAMIADVFSTALFVLGYDNPALDYFTDFG
IQALIISPTGESTETSGFDYFREKM

Sequences:

>Translated_345_residues
MRQKNMHSLRVYLYIAALGVGVLLLSLLLFSKPTPVYEEKEFPVLGTIVRVKVAGDKVSSNVLLNTAEQELYRLHNKFSP
NVEGSIIQKLNTDRKVEVDEEGLFLFQATYNYAVITGGAFDPTVRPLLKLWGFDDINSPKKVPIQEEINRTLENVDYRFI
KIDEEKREISLLKDGVEVDLGGIAKGYAIDLVIQKIKEIDPGATGFVDAGGDIGIIGPKFGELAWVIGIRDPFSQDALKS
IDTIYLTSGAVATSGDYERFFIEDGKKYHHILDPEDGYPAGNASSVTVIAEKAMIADVFSTALFVLGYDNPALDYFTDFG
IQALIISPTGESTETSGFDYFREKM
>Mature_345_residues
MRQKNMHSLRVYLYIAALGVGVLLLSLLLFSKPTPVYEEKEFPVLGTIVRVKVAGDKVSSNVLLNTAEQELYRLHNKFSP
NVEGSIIQKLNTDRKVEVDEEGLFLFQATYNYAVITGGAFDPTVRPLLKLWGFDDINSPKKVPIQEEINRTLENVDYRFI
KIDEEKREISLLKDGVEVDLGGIAKGYAIDLVIQKIKEIDPGATGFVDAGGDIGIIGPKFGELAWVIGIRDPFSQDALKS
IDTIYLTSGAVATSGDYERFFIEDGKKYHHILDPEDGYPAGNASSVTVIAEKAMIADVFSTALFVLGYDNPALDYFTDFG
IQALIISPTGESTETSGFDYFREKM

Specific function: Involved in the conversion of aminoimidazole ribotide (AIR), a purine intermediate, to the 4-amino-5-hydroxymethyl-2- methyl pyrimidine (HMP) moiety of thiamine [H]

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ApbE family [H]

Homologues:

Organism=Escherichia coli, GI1788543, Length=333, Percent_Identity=27.6276276276276, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003374 [H]

Pfam domain/function: PF02424 ApbE [H]

EC number: NA

Molecular weight: Translated: 38228; Mature: 38228

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKNMHSLRVYLYIAALGVGVLLLSLLLFSKPTPVYEEKEFPVLGTIVRVKVAGDKVSS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
NVLLNTAEQELYRLHNKFSPNVEGSIIQKLNTDRKVEVDEEGLFLFQATYNYAVITGGAF
CEEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEECCEEEEECCCC
DPTVRPLLKLWGFDDINSPKKVPIQEEINRTLENVDYRFIKIDEEKREISLLKDGVEVDL
CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCEEEC
GGIAKGYAIDLVIQKIKEIDPGATGFVDAGGDIGIIGPKFGELAWVIGIRDPFSQDALKS
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCEEEEEECCCCCCHHHHHH
IDTIYLTSGAVATSGDYERFFIEDGKKYHHILDPEDGYPAGNASSVTVIAEKAMIADVFS
CCEEEEECCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHH
TALFVLGYDNPALDYFTDFGIQALIISPTGESTETSGFDYFREKM
HEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MRQKNMHSLRVYLYIAALGVGVLLLSLLLFSKPTPVYEEKEFPVLGTIVRVKVAGDKVSS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
NVLLNTAEQELYRLHNKFSPNVEGSIIQKLNTDRKVEVDEEGLFLFQATYNYAVITGGAF
CEEEEHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEECCEEEEECCCC
DPTVRPLLKLWGFDDINSPKKVPIQEEINRTLENVDYRFIKIDEEKREISLLKDGVEVDL
CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCEEEC
GGIAKGYAIDLVIQKIKEIDPGATGFVDAGGDIGIIGPKFGELAWVIGIRDPFSQDALKS
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCEEEEEECCCCCCHHHHHH
IDTIYLTSGAVATSGDYERFFIEDGKKYHHILDPEDGYPAGNASSVTVIAEKAMIADVFS
CCEEEEECCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHH
TALFVLGYDNPALDYFTDFGIQALIISPTGESTETSGFDYFREKM
HEEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]