Definition Petrotoga mobilis SJ95 chromosome, complete genome.
Accession NC_010003
Length 2,169,548

Click here to switch to the map view.

The map label for this gene is yvyE [H]

Identifier: 160902858

GI number: 160902858

Start: 1518761

End: 1519378

Strand: Direct

Name: yvyE [H]

Synonym: Pmob_1413

Alternate gene names: 160902858

Gene position: 1518761-1519378 (Clockwise)

Preceding gene: 160902857

Following gene: 160902859

Centisome position: 70.0

GC content: 33.98

Gene sequence:

>618_bases
TTGAATTATAAATCAATAAAAGATCCGATCGAAATTACATACACTGTAGAAAGGTCAAAATTCATTGGTAATATCGCAAA
GACCAATTCGGTTGATGAAGCACAAAAATTTATAAAACAGATTTCCCAAATGTACAATAACGCCACGCATAACTGTTGGG
CTTATAAGGTGCATGAGGGAGGAAGAGAAATCGCTAATTATTCCGATAACAATGAACCATCAGGCACCGCTGGCAAACCT
ATATACGGTGTAATTGAAAAATTTGGTCTCTTGAACGTGACCATTGTTGTTACGAGGTATTTTGGAGGAGTGAAATTAGG
GATTCGAGGTTTAATAGATGCCTATTCTAAAACAGCTGAAGATGTTGTTAAAGCTTCTAAAGTGGTTACCTATGAAAAGG
TATTTATTTACGAGGCAAAATGTGACTACAGTAATTTTTCCTTCATACAAAACCTCATGCAAAAACAGAATAACTTCAAA
ATAATAAAGCAAAACTTTTCAGACGAAGTTTATTTCATATTTGAGGTATTAGAGGATAACAAAGAAGATGTGTTATCACT
AATAAAAAACAAGGTGTACAAATTAAATCTTGTCGGCAATTCGGAGGGAACTTTGTGA

Upstream 100 bases:

>100_bases
GTTGACAGCTCAGGATTCTATGAGATTTCTGCCAATCAATCCAGTGCGGCTAATAAATTTAACCTAACCGATGATTTTGA
AGGGAAGATAAAGATATATC

Downstream 100 bases:

>100_bases
ACAATAATTTATATAGAAAATACAGACCAAAAGATTTTGATGAAATTTTAGGACAACCTCATGTAGTAAAATACTTTAAA
AACGCTTTGAACAAGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNYKSIKDPIEITYTVERSKFIGNIAKTNSVDEAQKFIKQISQMYNNATHNCWAYKVHEGGREIANYSDNNEPSGTAGKP
IYGVIEKFGLLNVTIVVTRYFGGVKLGIRGLIDAYSKTAEDVVKASKVVTYEKVFIYEAKCDYSNFSFIQNLMQKQNNFK
IIKQNFSDEVYFIFEVLEDNKEDVLSLIKNKVYKLNLVGNSEGTL

Sequences:

>Translated_205_residues
MNYKSIKDPIEITYTVERSKFIGNIAKTNSVDEAQKFIKQISQMYNNATHNCWAYKVHEGGREIANYSDNNEPSGTAGKP
IYGVIEKFGLLNVTIVVTRYFGGVKLGIRGLIDAYSKTAEDVVKASKVVTYEKVFIYEAKCDYSNFSFIQNLMQKQNNFK
IIKQNFSDEVYFIFEVLEDNKEDVLSLIKNKVYKLNLVGNSEGTL
>Mature_205_residues
MNYKSIKDPIEITYTVERSKFIGNIAKTNSVDEAQKFIKQISQMYNNATHNCWAYKVHEGGREIANYSDNNEPSGTAGKP
IYGVIEKFGLLNVTIVVTRYFGGVKLGIRGLIDAYSKTAEDVVKASKVVTYEKVFIYEAKCDYSNFSFIQNLMQKQNNFK
IIKQNFSDEVYFIFEVLEDNKEDVLSLIKNKVYKLNLVGNSEGTL

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

Organism=Escherichia coli, GI87082338, Length=162, Percent_Identity=29.6296296296296, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 23367; Mature: 23367

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKSIKDPIEITYTVERSKFIGNIAKTNSVDEAQKFIKQISQMYNNATHNCWAYKVHEG
CCCCCCCCCEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
GREIANYSDNNEPSGTAGKPIYGVIEKFGLLNVTIVVTRYFGGVKLGIRGLIDAYSKTAE
CHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHH
DVVKASKVVTYEKVFIYEAKCDYSNFSFIQNLMQKQNNFKIIKQNFSDEVYFIFEVLEDN
HHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEHHHHHCC
KEDVLSLIKNKVYKLNLVGNSEGTL
HHHHHHHHHCCEEEEEEECCCCCCC
>Mature Secondary Structure
MNYKSIKDPIEITYTVERSKFIGNIAKTNSVDEAQKFIKQISQMYNNATHNCWAYKVHEG
CCCCCCCCCEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
GREIANYSDNNEPSGTAGKPIYGVIEKFGLLNVTIVVTRYFGGVKLGIRGLIDAYSKTAE
CHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHH
DVVKASKVVTYEKVFIYEAKCDYSNFSFIQNLMQKQNNFKIIKQNFSDEVYFIFEVLEDN
HHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEEHHHHHCC
KEDVLSLIKNKVYKLNLVGNSEGTL
HHHHHHHHHCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3141378; 8313894 [H]