| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
Click here to switch to the map view.
The map label for this gene is 160902847
Identifier: 160902847
GI number: 160902847
Start: 1507647
End: 1508345
Strand: Direct
Name: 160902847
Synonym: Pmob_1401
Alternate gene names: NA
Gene position: 1507647-1508345 (Clockwise)
Preceding gene: 160902846
Following gene: 160902848
Centisome position: 69.49
GC content: 33.62
Gene sequence:
>699_bases ATGTCTGATTTTGTCGAAAAAGTAAGCTCAAAGAATGTTTTATACACTAATATGCCCTTGGATTTAGAGATTCAAGAAAA AGGAATTCAAGGAGTTTATAAAAGTATCCTATACGAACATGATCTCAGCAGTAATCTAGCTAAAATTGGAATGCCGATTT TTAAGGGAGCCTATCTGCAAATTTTTCGAGGTACTAATCTAAAAGTAAGAGCATACTCTTCAAGGGCTGTTTATTTATTC AAAAGCAAAGTTTACAGCAGTGGAAAAGAAGGAAATATCAGATACCTTATAATAAACATTCCTGAAACAATTGTTAGAGT GCAAAGAAGGCAACATGCCAGGATCCCTGTTTCTGAAGAAGGTACCTTTTGTTTCAAAGAAGACCTAGAAAATAGTGAAA GTGAGGAGAACATTCAACCAACAAAATATCGGTTTATGACTAAAGATTTCAGTGCAGGAGGATTGGCTATCGTTACCTCT AAAGAGATGAAAGTCGGACAAAAGATAATAATAAATTTAGCATTAAAAAATGAGATCAGACTTGAAAACATGGAATCCGA GGTTGTTAGGTCTATTGGAAAAACTACAAGTGGTGAATACATTTATGGAATTAAGTTTTTAAACTTAACAAGAGAAAAAG AAGAAGAGCTGGTGAGGTTCGTTTTCAAATTAGAGCGGGAGTCATTTAAAAAGATTTGA
Upstream 100 bases:
>100_bases CCATATTAATTTTACCCAGAGATTGAAAGAGATGTTTGGAAAAGACCATTGATGTTCGGGGTGGATGAACGCTATAAAAT AGATAGAAAAGGGGTTTAAG
Downstream 100 bases:
>100_bases TACAGTACCTTTTTCATAACAAAAAGGGGGAAGTTTAATGTCAATCTATGATGAGATTAACGAACAGAAATTGGATGCAT TGAAGGAATTAGGAAACATA
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Flagellar Protein; Type IV Pilus Assembly Protein PilZ; Type Iv Pilus Assembly Protein Pilz
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSDFVEKVSSKNVLYTNMPLDLEIQEKGIQGVYKSILYEHDLSSNLAKIGMPIFKGAYLQIFRGTNLKVRAYSSRAVYLF KSKVYSSGKEGNIRYLIINIPETIVRVQRRQHARIPVSEEGTFCFKEDLENSESEENIQPTKYRFMTKDFSAGGLAIVTS KEMKVGQKIIINLALKNEIRLENMESEVVRSIGKTTSGEYIYGIKFLNLTREKEEELVRFVFKLERESFKKI
Sequences:
>Translated_232_residues MSDFVEKVSSKNVLYTNMPLDLEIQEKGIQGVYKSILYEHDLSSNLAKIGMPIFKGAYLQIFRGTNLKVRAYSSRAVYLF KSKVYSSGKEGNIRYLIINIPETIVRVQRRQHARIPVSEEGTFCFKEDLENSESEENIQPTKYRFMTKDFSAGGLAIVTS KEMKVGQKIIINLALKNEIRLENMESEVVRSIGKTTSGEYIYGIKFLNLTREKEEELVRFVFKLERESFKKI >Mature_231_residues SDFVEKVSSKNVLYTNMPLDLEIQEKGIQGVYKSILYEHDLSSNLAKIGMPIFKGAYLQIFRGTNLKVRAYSSRAVYLFK SKVYSSGKEGNIRYLIINIPETIVRVQRRQHARIPVSEEGTFCFKEDLENSESEENIQPTKYRFMTKDFSAGGLAIVTSK EMKVGQKIIINLALKNEIRLENMESEVVRSIGKTTSGEYIYGIKFLNLTREKEEELVRFVFKLERESFKKI
Specific function: Unknown
COG id: COG5581
COG function: function code M; Predicted glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26779; Mature: 26648
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFVEKVSSKNVLYTNMPLDLEIQEKGIQGVYKSILYEHDLSSNLAKIGMPIFKGAYLQ CCHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHCCCEEE IFRGTNLKVRAYSSRAVYLFKSKVYSSGKEGNIRYLIINIPETIVRVQRRQHARIPVSEE EEECCCEEEEEECCCEEEEEEEHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC GTFCFKEDLENSESEENIQPTKYRFMTKDFSAGGLAIVTSKEMKVGQKIIINLALKNEIR CCEEEHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHCCCEEEEEEEECCCEE LENMESEVVRSIGKTTSGEYIYGIKFLNLTREKEEELVRFVFKLERESFKKI CCCHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDFVEKVSSKNVLYTNMPLDLEIQEKGIQGVYKSILYEHDLSSNLAKIGMPIFKGAYLQ CHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHCCCEEE IFRGTNLKVRAYSSRAVYLFKSKVYSSGKEGNIRYLIINIPETIVRVQRRQHARIPVSEE EEECCCEEEEEECCCEEEEEEEHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC GTFCFKEDLENSESEENIQPTKYRFMTKDFSAGGLAIVTSKEMKVGQKIIINLALKNEIR CCEEEHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHCCCEEEEEEEECCCEE LENMESEVVRSIGKTTSGEYIYGIKFLNLTREKEEELVRFVFKLERESFKKI CCCHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA