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The map label for this gene is yfaD [C]

Identifier: 160902104

GI number: 160902104

Start: 678815

End: 679798

Strand: Direct

Name: yfaD [C]

Synonym: Pmob_0628

Alternate gene names: 160902104

Gene position: 678815-679798 (Clockwise)

Preceding gene: 160902103

Following gene: 160902108

Centisome position: 31.29

GC content: 32.62

Gene sequence:

>984_bases
ATGAATGAATTAGTGCACAATCCTCATGATCTATTCTTCAAACGAATTTTCAGTGACATAAGGATAGCTCGAGATTTCTT
ATGGAACTATCTCCCTCAAGAAGCTGTAGAAATAGTAGACCTAGATTATTTAATTCCTGAAAACAACAGTCATGTTGATG
AAAACCTAAGAGAAAGCCTCTCGGATATGTTGTACAAAACAAAGATAAAAGGACAAGATGGCTACATATACATTCTGATG
GAACACAAAAGCTACATTGAAGGGAAAGTAATCTTTCAACTGTTGAGATATATTACGAGCATCTGGGAAGAAAAATACGA
TCCCAAAACAAAAAAGGTACCAATAATAATACCGATGGTAATATACCATGGAAGAGAAATCTGGAACGTAGAAACGAATT
TATTAAATATGGTACAAGGGATAGAAGATTTACCAAATGAACTAAAAACATACTTACCTACATACCGATATGAAATATGT
GATTTCTCGATCAAAAGGAAAAAAAGGATAATAGGATTAACAGCGATGAAAGTTGCAATAGAAGCAATGAGAGCAGGAAC
GGCAATGACCAAAGAAGAATTTAAAGAAAGATTAAGAAGGGTATTTGAATACATAAAACAACTACCAGAAGAAGAGGTAC
ATGAATGGTTTGAAGAGTGTATGATCTACTTACTAAACGTAAGGGAAGATGTAACGATAGAGGAGATATTAAAAGTACAA
AAAGAAATAATGCCTGGAAGGGGTGAGATAGTTATGACGATAGCTGAAAAGTTGAGAAACGAAGGTAAATTAGAAGGAGA
AAGAGAAGGGAAACTTGAAGAAAGAAGGGAAGTAGCTATAAAGTTATTAAATAAACGATTTGGAAAAGAATTTACACAAG
AGATGAAAGAAAAGATAAAAGAAGCTGAAGAAAGAAGAATAAACCAAATAATTGACAACATATTTGAAATAACCATAGAA
GAGCTAAAAGAAATATTGAAGTAA

Upstream 100 bases:

>100_bases
CTCGCTTACGTATAATATGGCCTAATGCATGTTTTATAGATTTTTCAAAATATGGTATAATTAAATTGACAAACAAAATC
TAAAAAAAGAGAGGCCAGAC

Downstream 100 bases:

>100_bases
TGGTAGTAGGTGAAACACTATCTGATATTTTTGGATAGGTAACAGGGCAACACCCTTTCCCATTTCCTCATAGGTGAGTT
GCGGAGGGAAAGGGTAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNELVHNPHDLFFKRIFSDIRIARDFLWNYLPQEAVEIVDLDYLIPENNSHVDENLRESLSDMLYKTKIKGQDGYIYILM
EHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIYHGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEIC
DFSIKRKKRIIGLTAMKVAIEAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQ
KEIMPGRGEIVMTIAEKLRNEGKLEGEREGKLEERREVAIKLLNKRFGKEFTQEMKEKIKEAEERRINQIIDNIFEITIE
ELKEILK

Sequences:

>Translated_327_residues
MNELVHNPHDLFFKRIFSDIRIARDFLWNYLPQEAVEIVDLDYLIPENNSHVDENLRESLSDMLYKTKIKGQDGYIYILM
EHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIYHGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEIC
DFSIKRKKRIIGLTAMKVAIEAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQ
KEIMPGRGEIVMTIAEKLRNEGKLEGEREGKLEERREVAIKLLNKRFGKEFTQEMKEKIKEAEERRINQIIDNIFEITIE
ELKEILK
>Mature_327_residues
MNELVHNPHDLFFKRIFSDIRIARDFLWNYLPQEAVEIVDLDYLIPENNSHVDENLRESLSDMLYKTKIKGQDGYIYILM
EHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMVIYHGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEIC
DFSIKRKKRIIGLTAMKVAIEAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQ
KEIMPGRGEIVMTIAEKLRNEGKLEGEREGKLEERREVAIKLLNKRFGKEFTQEMKEKIKEAEERRINQIIDNIFEITIE
ELKEILK

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788577, Length=290, Percent_Identity=28.9655172413793, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1788643, Length=306, Percent_Identity=26.797385620915, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789816, Length=278, Percent_Identity=26.978417266187, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786324, Length=300, Percent_Identity=24.6666666666667, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 39227; Mature: 39227

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELVHNPHDLFFKRIFSDIRIARDFLWNYLPQEAVEIVDLDYLIPENNSHVDENLRESL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SDMLYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMV
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
IYHGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAI
HHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KEIMPGRGEIVMTIAEKLRNEGKLEGEREGKLEERREVAIKLLNKRFGKEFTQEMKEKIK
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAEERRINQIIDNIFEITIEELKEILK
HHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNELVHNPHDLFFKRIFSDIRIARDFLWNYLPQEAVEIVDLDYLIPENNSHVDENLRESL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SDMLYKTKIKGQDGYIYILMEHKSYIEGKVIFQLLRYITSIWEEKYDPKTKKVPIIIPMV
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHH
IYHGREIWNVETNLLNMVQGIEDLPNELKTYLPTYRYEICDFSIKRKKRIIGLTAMKVAI
HHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAMRAGTAMTKEEFKERLRRVFEYIKQLPEEEVHEWFEECMIYLLNVREDVTIEEILKVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
KEIMPGRGEIVMTIAEKLRNEGKLEGEREGKLEERREVAIKLLNKRFGKEFTQEMKEKIK
HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAEERRINQIIDNIFEITIEELKEILK
HHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]