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The map label for this gene is ssb [H]

Identifier: 160902035

GI number: 160902035

Start: 612736

End: 613251

Strand: Direct

Name: ssb [H]

Synonym: Pmob_0559

Alternate gene names: 160902035

Gene position: 612736-613251 (Clockwise)

Preceding gene: 160902034

Following gene: 160902036

Centisome position: 28.24

GC content: 35.27

Gene sequence:

>516_bases
ATGTCTATTTCTTATAACAAAGTTATTTTGGTTGGGAGATTGACCAGAGATCCAGAGATACGTTCTACTATGAATGGAAA
TAACGTTGCAAACTTTCATTTAGCTGTTGACGGAGGTACTTCAAACAATCAAGATGGCACAGATTTCATAAAAATTGTGG
CTTTTGGTAAACAAGCGGATTTTGCATCAAACTATTTAAAAAAAGGGAAATTGATCCTAGTTGAAGGATCGCTTCATATT
AATCAATGGACAGATAGAGATAATATAAAAAGAGAAACAGCTGAAATCTGGGCCAATAGAATGAATTTCATGGAAACAAA
AAAGGCTCAAGAAGCTAATGAATTTTCTGGTATGCCCATTGCGGTAGAAGAAGGTTTCTCTGATATAGACAATATTTCAG
ACACCGATCCGATCGAAGAAATAGGTGATGAAGCTTTTCTCGGAGACGACACTTTTTTAGAAGGAGACCTTGATGACCTT
GAAAATGATCTTTCTTCAGATAATAAACCTATCTGA

Upstream 100 bases:

>100_bases
CTTGAGAAAAAAGTAAGAAAAACCCAAAAAGAAGCAAAAATAAAGGTAGAAGAACCAGAAATTTCTGAAGAAATTTAACG
AAAAATAGGAAGTGTTTTTT

Downstream 100 bases:

>100_bases
TCTGAAAAATTTTAGAAATAAGTTTTTTAGGTAAAGGGGTAACTAGAACGAAAATAAAAAATGAGAAAAACGGAGGTTTT
AAATAAAATGGCTTACGTTA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSISYNKVILVGRLTRDPEIRSTMNGNNVANFHLAVDGGTSNNQDGTDFIKIVAFGKQADFASNYLKKGKLILVEGSLHI
NQWTDRDNIKRETAEIWANRMNFMETKKAQEANEFSGMPIAVEEGFSDIDNISDTDPIEEIGDEAFLGDDTFLEGDLDDL
ENDLSSDNKPI

Sequences:

>Translated_171_residues
MSISYNKVILVGRLTRDPEIRSTMNGNNVANFHLAVDGGTSNNQDGTDFIKIVAFGKQADFASNYLKKGKLILVEGSLHI
NQWTDRDNIKRETAEIWANRMNFMETKKAQEANEFSGMPIAVEEGFSDIDNISDTDPIEEIGDEAFLGDDTFLEGDLDDL
ENDLSSDNKPI
>Mature_170_residues
SISYNKVILVGRLTRDPEIRSTMNGNNVANFHLAVDGGTSNNQDGTDFIKIVAFGKQADFASNYLKKGKLILVEGSLHIN
QWTDRDNIKRETAEIWANRMNFMETKKAQEANEFSGMPIAVEEGFSDIDNISDTDPIEEIGDEAFLGDDTFLEGDLDDLE
NDLSSDNKPI

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=109, Percent_Identity=41.2844036697248, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19052; Mature: 18921

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISYNKVILVGRLTRDPEIRSTMNGNNVANFHLAVDGGTSNNQDGTDFIKIVAFGKQAD
CCCCCCEEEEEEECCCCCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCH
FASNYLKKGKLILVEGSLHINQWTDRDNIKRETAEIWANRMNFMETKKAQEANEFSGMPI
HHHHHHHCCCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AVEEGFSDIDNISDTDPIEEIGDEAFLGDDTFLEGDLDDLENDLSSDNKPI
EHHCCCCHHCCCCCCCCHHHHCCCEECCCCCEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SISYNKVILVGRLTRDPEIRSTMNGNNVANFHLAVDGGTSNNQDGTDFIKIVAFGKQAD
CCCCCEEEEEEECCCCCCHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCH
FASNYLKKGKLILVEGSLHINQWTDRDNIKRETAEIWANRMNFMETKKAQEANEFSGMPI
HHHHHHHCCCEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AVEEGFSDIDNISDTDPIEEIGDEAFLGDDTFLEGDLDDLENDLSSDNKPI
EHHCCCCHHCCCCCCCCHHHHCCCEECCCCCEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]