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The map label for this gene is ugpB [C]

Identifier: 160901999

GI number: 160901999

Start: 569318

End: 570568

Strand: Direct

Name: ugpB [C]

Synonym: Pmob_0523

Alternate gene names: 160901999

Gene position: 569318-570568 (Clockwise)

Preceding gene: 160901998

Following gene: 160902000

Centisome position: 26.24

GC content: 38.05

Gene sequence:

>1251_bases
ATGAAAAAGTTTTTTGTAGTGTTGGTATGTTTGATTATCAGTTCGTTGATGCTATCAGCAAAAAGTGTAACTGTTGAATT
TTGGACACTTTCTTTGTCTACATTTTCAGATTACATTAACTCAGTCATAGATACTTTCGAAGCTGCAAATCCTGACATAA
AAATCAACTGGGTCGACGTTCCTTACGATGCTTTTCAACAAAAACTCATTGCTGCAATAGCCTCTGGTAACCCGCCTGAT
CTGGTGAATATGAATACTCCTTGGGTTATAGACTTTGCAGCTCAAGATGCATTAAGCCCTATCGATGAATTCGTAACTGA
AGTGGACAAATACTTATACTTACCTAACTACTGGGAAGCTACCGTCATAGATGGAAAATCATATGCTATTCCTTGGTATC
TAAGTCCCCAAATTATGCTTTACAACAAACAGATTTTTGAAGAAGCGGGTTTAGACCCTAATGTTCCACCAAAGACATGG
GATGAAATCATAGAATATTCAAGGATAATTAAAGAAAAAACTGGCCTATACGGATATCAACCCAACATTGTTGCGCATAT
CGATCTTCAGGAAGAGGGCGTCCCGTTAATTTCTGAAGATGGAAAAAAGGCTATAGTAAACACCCCTGAGGCAATGGCTA
AATTGAAACAACATCAACTTGCCTTCAAAGAGGCACTTATGCCTCAAGATTTAGGAGGTTATCAAGCCGGTACCCAAAAG
TATGCCGGTGGGAGAATTGCCATGTTTCCTGTTGGAATAACTATGGTTAAACATGTCCAAATAAATAGTCCAAGTATATT
CGAAGTTAGTGATGTTACTTCCTTCCCTCTGGGAAAAGGTAAAAAAATTCCTGCGGGAGCAATGAATGTGGCAGTGCCAT
ACAATGCGAAAAATAAAGCTGAAGCGGTAAAATTTGGATTATGGCTAACTTCTCCATATTGGCAAGTGGAGTTCGCTAAG
ATTGCAACAGTTGTTCCCTCAACAAAAATATCGCTCGAAGAAGATCCTTGGTTTTTAGAAAGGGCAGAAAGAGATTTGAA
TGTTAAAGCACAATTAGTAGCTAGTGAATCAATGATATATGGTTTTGATCAAGATGCAATCGGGAAAATAATAGGGCCAG
CGAAATATTCTGAATTCAGAAGGATCTTAGATGATTATTGGATACCTGCTATTAAAGGTGATTACACAGCCGAAGAAGCA
TTATCCTTAGCTGAAGAAGAGTTAGATGATCTACTATCCAGTGAATTTTAG

Upstream 100 bases:

>100_bases
GAACTTTTCAAGATCCATCCTGACGAAATAGAAAACCAGATTCAAAAGACATCAAAGTTATAGCCACGAAATGTGGCAAA
AAAGAAGGAGGTAGATTGGC

Downstream 100 bases:

>100_bases
TTTTCTATTTATTGCATTGGTTAAAAGGCGATAGGGTATCGACCTATCGCCCCTTGATTTAGGAGGTGTGACCTTTGAAA
CTTAGTAGAAAAAAACAAAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKKFFVVLVCLIISSLMLSAKSVTVEFWTLSLSTFSDYINSVIDTFEAANPDIKINWVDVPYDAFQQKLIAAIASGNPPD
LVNMNTPWVIDFAAQDALSPIDEFVTEVDKYLYLPNYWEATVIDGKSYAIPWYLSPQIMLYNKQIFEEAGLDPNVPPKTW
DEIIEYSRIIKEKTGLYGYQPNIVAHIDLQEEGVPLISEDGKKAIVNTPEAMAKLKQHQLAFKEALMPQDLGGYQAGTQK
YAGGRIAMFPVGITMVKHVQINSPSIFEVSDVTSFPLGKGKKIPAGAMNVAVPYNAKNKAEAVKFGLWLTSPYWQVEFAK
IATVVPSTKISLEEDPWFLERAERDLNVKAQLVASESMIYGFDQDAIGKIIGPAKYSEFRRILDDYWIPAIKGDYTAEEA
LSLAEEELDDLLSSEF

Sequences:

>Translated_416_residues
MKKFFVVLVCLIISSLMLSAKSVTVEFWTLSLSTFSDYINSVIDTFEAANPDIKINWVDVPYDAFQQKLIAAIASGNPPD
LVNMNTPWVIDFAAQDALSPIDEFVTEVDKYLYLPNYWEATVIDGKSYAIPWYLSPQIMLYNKQIFEEAGLDPNVPPKTW
DEIIEYSRIIKEKTGLYGYQPNIVAHIDLQEEGVPLISEDGKKAIVNTPEAMAKLKQHQLAFKEALMPQDLGGYQAGTQK
YAGGRIAMFPVGITMVKHVQINSPSIFEVSDVTSFPLGKGKKIPAGAMNVAVPYNAKNKAEAVKFGLWLTSPYWQVEFAK
IATVVPSTKISLEEDPWFLERAERDLNVKAQLVASESMIYGFDQDAIGKIIGPAKYSEFRRILDDYWIPAIKGDYTAEEA
LSLAEEELDDLLSSEF
>Mature_416_residues
MKKFFVVLVCLIISSLMLSAKSVTVEFWTLSLSTFSDYINSVIDTFEAANPDIKINWVDVPYDAFQQKLIAAIASGNPPD
LVNMNTPWVIDFAAQDALSPIDEFVTEVDKYLYLPNYWEATVIDGKSYAIPWYLSPQIMLYNKQIFEEAGLDPNVPPKTW
DEIIEYSRIIKEKTGLYGYQPNIVAHIDLQEEGVPLISEDGKKAIVNTPEAMAKLKQHQLAFKEALMPQDLGGYQAGTQK
YAGGRIAMFPVGITMVKHVQINSPSIFEVSDVTSFPLGKGKKIPAGAMNVAVPYNAKNKAEAVKFGLWLTSPYWQVEFAK
IATVVPSTKISLEEDPWFLERAERDLNVKAQLVASESMIYGFDQDAIGKIIGPAKYSEFRRILDDYWIPAIKGDYTAEEA
LSLAEEELDDLLSSEF

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=437, Percent_Identity=24.4851258581236, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46588; Mature: 46588

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFVVLVCLIISSLMLSAKSVTVEFWTLSLSTFSDYINSVIDTFEAANPDIKINWVDV
CHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
PYDAFQQKLIAAIASGNPPDLVNMNTPWVIDFAAQDALSPIDEFVTEVDKYLYLPNYWEA
CHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHEEECCCCCEE
TVIDGKSYAIPWYLSPQIMLYNKQIFEEAGLDPNVPPKTWDEIIEYSRIIKEKTGLYGYQ
EEECCCCEEEEEEECCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PNIVAHIDLQEEGVPLISEDGKKAIVNTPEAMAKLKQHQLAFKEALMPQDLGGYQAGTQK
CCEEEEEEECCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YAGGRIAMFPVGITMVKHVQINSPSIFEVSDVTSFPLGKGKKIPAGAMNVAVPYNAKNKA
CCCCEEEEEECCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCH
EAVKFGLWLTSPYWQVEFAKIATVVPSTKISLEEDPWFLERAERDLNVKAQLVASESMIY
HHEEEEEEECCCCCEEEHHHHHEECCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCEEE
GFDQDAIGKIIGPAKYSEFRRILDDYWIPAIKGDYTAEEALSLAEEELDDLLSSEF
ECCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKFFVVLVCLIISSLMLSAKSVTVEFWTLSLSTFSDYINSVIDTFEAANPDIKINWVDV
CHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
PYDAFQQKLIAAIASGNPPDLVNMNTPWVIDFAAQDALSPIDEFVTEVDKYLYLPNYWEA
CHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHEEECCCCCEE
TVIDGKSYAIPWYLSPQIMLYNKQIFEEAGLDPNVPPKTWDEIIEYSRIIKEKTGLYGYQ
EEECCCCEEEEEEECCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PNIVAHIDLQEEGVPLISEDGKKAIVNTPEAMAKLKQHQLAFKEALMPQDLGGYQAGTQK
CCEEEEEEECCCCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YAGGRIAMFPVGITMVKHVQINSPSIFEVSDVTSFPLGKGKKIPAGAMNVAVPYNAKNKA
CCCCEEEEEECCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCH
EAVKFGLWLTSPYWQVEFAKIATVVPSTKISLEEDPWFLERAERDLNVKAQLVASESMIY
HHEEEEEEECCCCCEEEHHHHHEECCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCEEE
GFDQDAIGKIIGPAKYSEFRRILDDYWIPAIKGDYTAEEALSLAEEELDDLLSSEF
ECCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA