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The map label for this gene is 160901906

Identifier: 160901906

GI number: 160901906

Start: 458752

End: 459171

Strand: Direct

Name: 160901906

Synonym: Pmob_0424

Alternate gene names: NA

Gene position: 458752-459171 (Clockwise)

Preceding gene: 160901905

Following gene: 160901907

Centisome position: 21.15

GC content: 49.05

Gene sequence:

>420_bases
ATGAAAACAGTATGGAACTGGGGGCAGGCGGTTTTTACTGCTATTGGCGGATTTCTTGGCTGGTTTCTTGGAGGGCTGGA
TGGATTTTTATATGCTCTCGTCGCTTTTGTGGCCATTGACTATGTGACCGGCGTGATGTGTGCCATTATAGACAGAAAGC
TTTCAAGTGAAGTCGGAGCCAAGGGCATCTTCAAGAAGGTGCTTATTTTTGTGCTGGTGGGTGTGGGACACATCATCGAC
AGCCAGGTGCTCGTAAGCGGCGGGGCAATCCGGACAGCGGTCATCTTCTTTTACTTGAGCAACGAGGGCATTTCAATACT
GGAAAATGCAGCACATATAGGACTGCCCATTCCTGAAAAGCTGAAGAACGCGCTGGAACAACTGCATGGCCGCTCAATTG
AGGAGGATGAGAAGAAATGA

Upstream 100 bases:

>100_bases
GAAGCAAATATAGTTTAGATGTTTTATTAATTCAGCGCTTTGCTATAAGGCAGGGCGTTTTTTTATATGCAAAACTCAAG
TTGAACGGAGGGTTAAGACA

Downstream 100 bases:

>100_bases
AGCTTTTTACAAAGTACATGACGCGAAACGACTGCTATACGGCAGGTCGGAAAATCACGCCTAAAGGAATCATGGTACAT
TCGACGGCTGTGCCGGGCGT

Product: toxin secretion/phage lysis holin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKTVWNWGQAVFTAIGGFLGWFLGGLDGFLYALVAFVAIDYVTGVMCAIIDRKLSSEVGAKGIFKKVLIFVLVGVGHIID
SQVLVSGGAIRTAVIFFYLSNEGISILENAAHIGLPIPEKLKNALEQLHGRSIEEDEKK

Sequences:

>Translated_139_residues
MKTVWNWGQAVFTAIGGFLGWFLGGLDGFLYALVAFVAIDYVTGVMCAIIDRKLSSEVGAKGIFKKVLIFVLVGVGHIID
SQVLVSGGAIRTAVIFFYLSNEGISILENAAHIGLPIPEKLKNALEQLHGRSIEEDEKK
>Mature_139_residues
MKTVWNWGQAVFTAIGGFLGWFLGGLDGFLYALVAFVAIDYVTGVMCAIIDRKLSSEVGAKGIFKKVLIFVLVGVGHIID
SQVLVSGGAIRTAVIFFYLSNEGISILENAAHIGLPIPEKLKNALEQLHGRSIEEDEKK

Specific function: Unknown

COG id: COG4824

COG function: function code R; Phage-related holin (Lysis protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cp-1 holin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006480 [H]

Pfam domain/function: PF05105 Phage_holin_4 [H]

EC number: NA

Molecular weight: Translated: 15053; Mature: 15053

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVWNWGQAVFTAIGGFLGWFLGGLDGFLYALVAFVAIDYVTGVMCAIIDRKLSSEVGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
KGIFKKVLIFVLVGVGHIIDSQVLVSGGAIRTAVIFFYLSNEGISILENAAHIGLPIPEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH
LKNALEQLHGRSIEEDEKK
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKTVWNWGQAVFTAIGGFLGWFLGGLDGFLYALVAFVAIDYVTGVMCAIIDRKLSSEVGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
KGIFKKVLIFVLVGVGHIIDSQVLVSGGAIRTAVIFFYLSNEGISILENAAHIGLPIPEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH
LKNALEQLHGRSIEEDEKK
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]