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The map label for this gene is yidA [C]

Identifier: 160901544

GI number: 160901544

Start: 47667

End: 48500

Strand: Direct

Name: yidA [C]

Synonym: Pmob_0053

Alternate gene names: 160901544

Gene position: 47667-48500 (Clockwise)

Preceding gene: 160901541

Following gene: 160901545

Centisome position: 2.2

GC content: 32.01

Gene sequence:

>834_bases
ATGAAAAAAACCTTTGTTTTTGATTTGGATGGAACTCTTTTAAATTCTGAGGTAAGAATTTCGCCAAAAACATACCAAGC
TTTAAAAAGATTAAAAGAAGAAGGACATATTATAATAATAGCAAGTGGAAGAATGTACGCTTCAACTATGTACGTAGTGG
AAAACTTTCTACCTTTTTTGAAAGGGAATGTGATTATTTCCTCATACAACGGGGGATATATAGTCGATCACAATGGAAAA
GTAGTTTTTGAAAAAGGTGTAGCAAATGAAAGTGCAATTAAATGTATAAAATTTCTTAGAGACCTTAATATCCACAGACA
TATCTATATAAACGATAAACTTATTTCGGAAATAGACGATAAAGAGATTAGAGATTACTCTAAACATTCATTTGTTGATT
ACGTACTGGTAGATGATTTAATAGCTGAAATAGAAACCTCATCTCACCCAACATTAAAAATATTGGCAATTGGAGAGCCA
GATAAAATAGACGTAATTAAAAAATTAGCGGAAAATGAGCTCCAAGGAGAGTTTAACCTTATGAAATCTTGGGATACCTA
TTTGGACTTTATTCCTTACGGTGTCTCCAAAGGAAATAGCTTGAAGATAATTTCAAAAATCTACAACTTAGATCCAAATA
CTCTTTACGTTTTTGGTGATTCCGAAAACGATATAGACATGCTTGAATTAACAAAAAACAGTTTCGCGATGGGAAACGCT
AAAGAAGATGTAAAAAAAGTAGCAAATTACTTGTTACCAAGTAACGATGAGGATGGTGTGGCATATGCCATTGAAAAGAT
ACTGGCTGATGATCTCGATAATGTTAATATTTAG

Upstream 100 bases:

>100_bases
AATGATTTATATGGTAAAATAGTATAAAAGAAGGGGCGCTAATACTCATAAAAGAAGAAATTTGTTTTTAAAAAAGTTAC
AGTTTGGAAAGGGGAAGAAT

Downstream 100 bases:

>100_bases
CTTTACTTTTGGAAGTATATACGATATAATAAAAGAGGATAATCAAATAGTTGGAAAATTTTTTCATACTTTAACCGATA
TTGAAAATACTGAATTAGAC

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKTFVFDLDGTLLNSEVRISPKTYQALKRLKEEGHIIIIASGRMYASTMYVVENFLPFLKGNVIISSYNGGYIVDHNGK
VVFEKGVANESAIKCIKFLRDLNIHRHIYINDKLISEIDDKEIRDYSKHSFVDYVLVDDLIAEIETSSHPTLKILAIGEP
DKIDVIKKLAENELQGEFNLMKSWDTYLDFIPYGVSKGNSLKIISKIYNLDPNTLYVFGDSENDIDMLELTKNSFAMGNA
KEDVKKVANYLLPSNDEDGVAYAIEKILADDLDNVNI

Sequences:

>Translated_277_residues
MKKTFVFDLDGTLLNSEVRISPKTYQALKRLKEEGHIIIIASGRMYASTMYVVENFLPFLKGNVIISSYNGGYIVDHNGK
VVFEKGVANESAIKCIKFLRDLNIHRHIYINDKLISEIDDKEIRDYSKHSFVDYVLVDDLIAEIETSSHPTLKILAIGEP
DKIDVIKKLAENELQGEFNLMKSWDTYLDFIPYGVSKGNSLKIISKIYNLDPNTLYVFGDSENDIDMLELTKNSFAMGNA
KEDVKKVANYLLPSNDEDGVAYAIEKILADDLDNVNI
>Mature_277_residues
MKKTFVFDLDGTLLNSEVRISPKTYQALKRLKEEGHIIIIASGRMYASTMYVVENFLPFLKGNVIISSYNGGYIVDHNGK
VVFEKGVANESAIKCIKFLRDLNIHRHIYINDKLISEIDDKEIRDYSKHSFVDYVLVDDLIAEIETSSHPTLKILAIGEP
DKIDVIKKLAENELQGEFNLMKSWDTYLDFIPYGVSKGNSLKIISKIYNLDPNTLYVFGDSENDIDMLELTKNSFAMGNA
KEDVKKVANYLLPSNDEDGVAYAIEKILADDLDNVNI

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=272, Percent_Identity=30.1470588235294, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787043, Length=275, Percent_Identity=26.1818181818182, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786982, Length=278, Percent_Identity=26.2589928057554, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87081790, Length=287, Percent_Identity=26.1324041811847, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI48994981, Length=271, Percent_Identity=25.4612546125461, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081741, Length=251, Percent_Identity=23.9043824701195, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 31388; Mature: 31388

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFVFDLDGTLLNSEVRISPKTYQALKRLKEEGHIIIIASGRMYASTMYVVENFLPFL
CCCEEEEECCCEEECCEEEECHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHH
KGNVIISSYNGGYIVDHNGKVVFEKGVANESAIKCIKFLRDLNIHRHIYINDKLISEIDD
CCCEEEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHCCH
KEIRDYSKHSFVDYVLVDDLIAEIETSSHPTLKILAIGEPDKIDVIKKLAENELQGEFNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHH
MKSWDTYLDFIPYGVSKGNSLKIISKIYNLDPNTLYVFGDSENDIDMLELTKNSFAMGNA
HHHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCC
KEDVKKVANYLLPSNDEDGVAYAIEKILADDLDNVNI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKTFVFDLDGTLLNSEVRISPKTYQALKRLKEEGHIIIIASGRMYASTMYVVENFLPFL
CCCEEEEECCCEEECCEEEECHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHH
KGNVIISSYNGGYIVDHNGKVVFEKGVANESAIKCIKFLRDLNIHRHIYINDKLISEIDD
CCCEEEEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHCCH
KEIRDYSKHSFVDYVLVDDLIAEIETSSHPTLKILAIGEPDKIDVIKKLAENELQGEFNL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHH
MKSWDTYLDFIPYGVSKGNSLKIISKIYNLDPNTLYVFGDSENDIDMLELTKNSFAMGNA
HHHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCC
KEDVKKVANYLLPSNDEDGVAYAIEKILADDLDNVNI
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA