| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877541
Identifier: 160877541
GI number: 160877541
Start: 5247187
End: 5248215
Strand: Direct
Name: 160877541
Synonym: Sbal195_4440
Alternate gene names: NA
Gene position: 5247187-5248215 (Clockwise)
Preceding gene: 160877540
Following gene: 160877542
Centisome position: 98.13
GC content: 49.27
Gene sequence:
>1029_bases ATGATGGCCAAGTACGGCGCATGCCTTTTCTGTTTATCCGCCAGTGTTGCCACGTTAGTGCAGGCTGAATCCTTAACGAT AAGTTCCCTCGGTAATTTAGACCTGAGTTATGTGCAACCACAGAAAGTCGCCAGTTATGAGGGCAGCCCTTTGCCCGCAC AGGTTGAAATCCTCCCCGGTAATGATTACTGGATCAGCACGCCGGAGAATATCCAGCAGATCAGCTTCCTCGTCGGCCAA GGCCAGCTCGTCACTAAAGGCCAAGCGATTGTCAAACTGACAGGGCCAGAAGTGTTCCACTACCTTGCCCAAGTCGAAGC CGCAGGCAGCTTATATCAACTGGCAAAAAGCCGTTATGAGCGTAATAAACCCTTATTAAACAATGGCAGTATCAGCGCCG AAAAGTGGCGCGAGATCAGCCAAGACTACTTCAGCACTCACCTCGAATACGAGCACATGCAGCATTTTATGGAGATAGTC AAAAGCACAGATGCCACCACAGACTCCCTAGTGGTGGGCACACCAGTGGCGGGAATAGTTAAACTCAACCAAGTGAATGG ACCTTATATGGCGGGTTCACAGCTATTTTCACTGGTGCCTAGCGACAGTATTCGCGTCAAAGTCAGCGTGCCTATGAGCC AGTCACATTCGCTCTCGGCGGTAAACATCAATCAGTGCCATATCGCCATTGAGTCCATGTCGGCCATCGCCGAAGGTGCC TTCGTGACCGCTTGGTCATCACCCGTGCCGCAGGAATGTAACTTACTGTTAGGACAACAGATCACTGTGATACCCGAGTA TCAAAAGGCGGTGTATTTATTGCCTAAAAATAGTGTTTTTAGTTGGGAGCAAGATAGCCAAGTCTTCACTAAAACCGCCG ACACGCTCACCTCGATTACGATCGATATTCTCGGTTCAACCCCAGAGCAATATATTGTTGAAAGCGATCAAGATCTGAGC CAAATCCAAGTGTTATCCCAGTCAGTTGCCGCAGTTAAAGGCATAATGCTTGGCCTAGGAGGCGAATAA
Upstream 100 bases:
>100_bases GCTATATGGATGCGCTCGATACCGAATCCCGCTTGGCACTGAACCAAGTCGCGCAGCAACAACTGCACTCCCAACAACTG CAAGCCTTAGGAATTTCATT
Downstream 100 bases:
>100_bases GATGTTGACCTCAGTCATCCGCTTTTCGCTCACGCAGCGCCTATTTGTGCTGATTGTGGCGCTGATTATTATGTTAGCGG GAGCGCGAGCCTGGTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MMAKYGACLFCLSASVATLVQAESLTISSLGNLDLSYVQPQKVASYEGSPLPAQVEILPGNDYWISTPENIQQISFLVGQ GQLVTKGQAIVKLTGPEVFHYLAQVEAAGSLYQLAKSRYERNKPLLNNGSISAEKWREISQDYFSTHLEYEHMQHFMEIV KSTDATTDSLVVGTPVAGIVKLNQVNGPYMAGSQLFSLVPSDSIRVKVSVPMSQSHSLSAVNINQCHIAIESMSAIAEGA FVTAWSSPVPQECNLLLGQQITVIPEYQKAVYLLPKNSVFSWEQDSQVFTKTADTLTSITIDILGSTPEQYIVESDQDLS QIQVLSQSVAAVKGIMLGLGGE
Sequences:
>Translated_342_residues MMAKYGACLFCLSASVATLVQAESLTISSLGNLDLSYVQPQKVASYEGSPLPAQVEILPGNDYWISTPENIQQISFLVGQ GQLVTKGQAIVKLTGPEVFHYLAQVEAAGSLYQLAKSRYERNKPLLNNGSISAEKWREISQDYFSTHLEYEHMQHFMEIV KSTDATTDSLVVGTPVAGIVKLNQVNGPYMAGSQLFSLVPSDSIRVKVSVPMSQSHSLSAVNINQCHIAIESMSAIAEGA FVTAWSSPVPQECNLLLGQQITVIPEYQKAVYLLPKNSVFSWEQDSQVFTKTADTLTSITIDILGSTPEQYIVESDQDLS QIQVLSQSVAAVKGIMLGLGGE >Mature_342_residues MMAKYGACLFCLSASVATLVQAESLTISSLGNLDLSYVQPQKVASYEGSPLPAQVEILPGNDYWISTPENIQQISFLVGQ GQLVTKGQAIVKLTGPEVFHYLAQVEAAGSLYQLAKSRYERNKPLLNNGSISAEKWREISQDYFSTHLEYEHMQHFMEIV KSTDATTDSLVVGTPVAGIVKLNQVNGPYMAGSQLFSLVPSDSIRVKVSVPMSQSHSLSAVNINQCHIAIESMSAIAEGA FVTAWSSPVPQECNLLLGQQITVIPEYQKAVYLLPKNSVFSWEQDSQVFTKTADTLTSITIDILGSTPEQYIVESDQDLS QIQVLSQSVAAVKGIMLGLGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37145; Mature: 37145
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAKYGACLFCLSASVATLVQAESLTISSLGNLDLSYVQPQKVASYEGSPLPAQVEILPG CCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCHHHHCCCCCCCCEEEEEECC NDYWISTPENIQQISFLVGQGQLVTKGQAIVKLTGPEVFHYLAQVEAAGSLYQLAKSRYE CCEEECCCHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH RNKPLLNNGSISAEKWREISQDYFSTHLEYEHMQHFMEIVKSTDATTDSLVVGTPVAGIV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEE KLNQVNGPYMAGSQLFSLVPSDSIRVKVSVPMSQSHSLSAVNINQCHIAIESMSAIAEGA EEEECCCCEECHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEHHEEEEHHHHHHHHCCC FVTAWSSPVPQECNLLLGQQITVIPEYQKAVYLLPKNSVFSWEQDSQVFTKTADTLTSIT EEEECCCCCCHHHHEECCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEE IDILGSTPEQYIVESDQDLSQIQVLSQSVAAVKGIMLGLGGE EEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMAKYGACLFCLSASVATLVQAESLTISSLGNLDLSYVQPQKVASYEGSPLPAQVEILPG CCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCHHHHCCCCCCCCEEEEEECC NDYWISTPENIQQISFLVGQGQLVTKGQAIVKLTGPEVFHYLAQVEAAGSLYQLAKSRYE CCEEECCCHHHHHHHHHHCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH RNKPLLNNGSISAEKWREISQDYFSTHLEYEHMQHFMEIVKSTDATTDSLVVGTPVAGIV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEE KLNQVNGPYMAGSQLFSLVPSDSIRVKVSVPMSQSHSLSAVNINQCHIAIESMSAIAEGA EEEECCCCEECHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEHHEEEEHHHHHHHHCCC FVTAWSSPVPQECNLLLGQQITVIPEYQKAVYLLPKNSVFSWEQDSQVFTKTADTLTSIT EEEECCCCCCHHHHEECCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEE IDILGSTPEQYIVESDQDLSQIQVLSQSVAAVKGIMLGLGGE EEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA