| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877532
Identifier: 160877532
GI number: 160877532
Start: 5238255
End: 5239859
Strand: Direct
Name: 160877532
Synonym: Sbal195_4431
Alternate gene names: NA
Gene position: 5238255-5239859 (Clockwise)
Preceding gene: 160877531
Following gene: 160877533
Centisome position: 97.96
GC content: 49.1
Gene sequence:
>1605_bases ATGAAAGACTCCTTTTTTCGTTCAATGACTTGGCTACACACTTGGGTGGGATTACTCACCTGTTGGGTGTTATTTCTGGT GTTTTTTGCCGGAACAGCGGCCTATTACCGTGCTGAAATTAACCTATGGATGCAACCCGAAAACCACGGCAGCCAATATG ATGCCCATGCGGATAACCAGCAGCTGATACTCAAAGGTCTAACGGCCTTGGCACAGCAAGCCCCCGACGCTGAGACATGG TGGGTGTATCTGCCCACACAGCGGACGCCATTACTGACCTATGCGTGGAGTGAACCTGCCGCTGAAGGCCAGCGATTTGG TGATTATCATCAAGGCTTTATTAACCCAGCGACGGGTGAAGCCCTGCCCAAAGCACGGGAAAGTCGAGGTGGCGATTTCC TCTATCGACTGCATTTTGACTTGTACTACATGAGCGTCATCACTGCGCGTTGGATCGTCGGTTTTTGTACTATGTTCATG TTGGTCGCCATCATCAGCGGGATAGTGATCCACAAGCGGATTTTTAAGGATTTTTTTAGTTTTAGACCCGGCAAAGGCCC GCGCTCTTGGCTCGATGCCCACGTCGCCAGCTCAGTGCTTGCCTTACCTTTCCATCTTATGATCACTTATACCGGCCTAG TGACCCTGATGTTTATGTACATGCCATGGGGACTTAACACGCAATATGGTGATGAAACTCAAGCCTTTTATTCGCAATGG AAACCCATTTATAGCTCAAGTGTCCCTAGCGGTGAAGCCGCCACTATGCAGAGTCCGCAGCAACTGCTTGCTAGCCTTAA TGCTGCCATGCCCATGAGTGATGAAGCGGCGAGTCCAATAGAGATGCTACAGGTCGAGCACTTGAATGATGCCAACGCCA GGGTAACAGTTCGAATGAGTCCAGATCACAGCTTAAACCAGCAAGCACCTTGGTATCGCTTCAGCGCAGTAACGGGGAAA TTAACAGAAGAATCAACGGCTACATCGGCAGCGAATAAAACCCAAAGCACTATGATAGCGCTTCACAGCGGCCGCTTTGC TGGCCAAGGTTTGAGATTATTATATTTACTAGCAGGGATGACAGGCTGCGTAATGATTGCGACGGGCGCCATCATGTGGG CAGAAAAACTTGTTCAGAAACAACAAAAAAGCGGCCAGTTCAAACCCGGTTTAGCCTTAGTAAAAATGCTGAATCTGGCA ACCTTTGCGGGTCTTCCCATTGCGTTAGCCAGTTATTTCTACGCCAACCGACTCTTACCCGTCACCTTTGTGGATAGAGA AAACTGGGAAATCCATTGTTTCTTTATCAGTTGGGCGTTAGTCGCGCTACTCGCTTGCTTCAAACGAGATAAACAGACAT GGCAACGACTCTTTTTACTCACCGCCTTACTTTATGGCCTGCTACCTCTGCTCAATGCCATGACTTCGCAGTATCAGCTG ATGAGCAACCTACAGCGCCAAGCCTATGTTCTCGCAGGATTTGATCTGATGATGCTCGCCCTTGCAGCGCTGTTTTACAT GGCAGCTAAACGCTTGCGTAGCTCCCAAAAAGTACGTGCTGCACAGGTAACCAAAGCGACCGCAGAATTAGGAATCGAAT CATGA
Upstream 100 bases:
>100_bases GGCGATACTGGCTGGATTTATTCGCGCTTAGCGGTCTGCTGTATTTAGCCTACCTTGCCGCTAAGGCGTTGGATATCAAT CCTATTCAAGGTGGCGGATT
Downstream 100 bases:
>100_bases CAGCCACAAGCGAGTTATTAACCTGTTTTATCGCCATGGTGCTGTTGGCATTGTCTTATTTTAGCCACCACCGCGCAGTG CGTAACCGCCCGTTAACCGA
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix Family Protein; Iron Uptake Protein; Aspartate Kinase; PepSY-Associated Membrane Protein; Transmembrane Protein; Response Regulator Receiver Protein; Iron-Regulated Membrane Protein DUF; Transmembrane PepSY Domain-Containing Protein; PepSY Domain Protein; Pepsy-Associated Tm Helix DomaiN-Containing Protein; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKDSFFRSMTWLHTWVGLLTCWVLFLVFFAGTAAYYRAEINLWMQPENHGSQYDAHADNQQLILKGLTALAQQAPDAETW WVYLPTQRTPLLTYAWSEPAAEGQRFGDYHQGFINPATGEALPKARESRGGDFLYRLHFDLYYMSVITARWIVGFCTMFM LVAIISGIVIHKRIFKDFFSFRPGKGPRSWLDAHVASSVLALPFHLMITYTGLVTLMFMYMPWGLNTQYGDETQAFYSQW KPIYSSSVPSGEAATMQSPQQLLASLNAAMPMSDEAASPIEMLQVEHLNDANARVTVRMSPDHSLNQQAPWYRFSAVTGK LTEESTATSAANKTQSTMIALHSGRFAGQGLRLLYLLAGMTGCVMIATGAIMWAEKLVQKQQKSGQFKPGLALVKMLNLA TFAGLPIALASYFYANRLLPVTFVDRENWEIHCFFISWALVALLACFKRDKQTWQRLFLLTALLYGLLPLLNAMTSQYQL MSNLQRQAYVLAGFDLMMLALAALFYMAAKRLRSSQKVRAAQVTKATAELGIES
Sequences:
>Translated_534_residues MKDSFFRSMTWLHTWVGLLTCWVLFLVFFAGTAAYYRAEINLWMQPENHGSQYDAHADNQQLILKGLTALAQQAPDAETW WVYLPTQRTPLLTYAWSEPAAEGQRFGDYHQGFINPATGEALPKARESRGGDFLYRLHFDLYYMSVITARWIVGFCTMFM LVAIISGIVIHKRIFKDFFSFRPGKGPRSWLDAHVASSVLALPFHLMITYTGLVTLMFMYMPWGLNTQYGDETQAFYSQW KPIYSSSVPSGEAATMQSPQQLLASLNAAMPMSDEAASPIEMLQVEHLNDANARVTVRMSPDHSLNQQAPWYRFSAVTGK LTEESTATSAANKTQSTMIALHSGRFAGQGLRLLYLLAGMTGCVMIATGAIMWAEKLVQKQQKSGQFKPGLALVKMLNLA TFAGLPIALASYFYANRLLPVTFVDRENWEIHCFFISWALVALLACFKRDKQTWQRLFLLTALLYGLLPLLNAMTSQYQL MSNLQRQAYVLAGFDLMMLALAALFYMAAKRLRSSQKVRAAQVTKATAELGIES >Mature_534_residues MKDSFFRSMTWLHTWVGLLTCWVLFLVFFAGTAAYYRAEINLWMQPENHGSQYDAHADNQQLILKGLTALAQQAPDAETW WVYLPTQRTPLLTYAWSEPAAEGQRFGDYHQGFINPATGEALPKARESRGGDFLYRLHFDLYYMSVITARWIVGFCTMFM LVAIISGIVIHKRIFKDFFSFRPGKGPRSWLDAHVASSVLALPFHLMITYTGLVTLMFMYMPWGLNTQYGDETQAFYSQW KPIYSSSVPSGEAATMQSPQQLLASLNAAMPMSDEAASPIEMLQVEHLNDANARVTVRMSPDHSLNQQAPWYRFSAVTGK LTEESTATSAANKTQSTMIALHSGRFAGQGLRLLYLLAGMTGCVMIATGAIMWAEKLVQKQQKSGQFKPGLALVKMLNLA TFAGLPIALASYFYANRLLPVTFVDRENWEIHCFFISWALVALLACFKRDKQTWQRLFLLTALLYGLLPLLNAMTSQYQL MSNLQRQAYVLAGFDLMMLALAALFYMAAKRLRSSQKVRAAQVTKATAELGIES
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60111; Mature: 60111
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSFFRSMTWLHTWVGLLTCWVLFLVFFAGTAAYYRAEINLWMQPENHGSQYDAHADNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEECCCCCCCCCCCCCCCH QLILKGLTALAQQAPDAETWWVYLPTQRTPLLTYAWSEPAAEGQRFGDYHQGFINPATGE HHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHCCCHHHCCCCCCCCC ALPKARESRGGDFLYRLHFDLYYMSVITARWIVGFCTMFMLVAIISGIVIHKRIFKDFFS CCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRPGKGPRSWLDAHVASSVLALPFHLMITYTGLVTLMFMYMPWGLNTQYGDETQAFYSQW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC KPIYSSSVPSGEAATMQSPQQLLASLNAAMPMSDEAASPIEMLQVEHLNDANARVTVRMS CHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEC PDHSLNQQAPWYRFSAVTGKLTEESTATSAANKTQSTMIALHSGRFAGQGLRLLYLLAGM CCCCCCCCCCCEEEEHHHCCCCCHHHHHHHHCHHHHHEEEEECCCCCCCHHHHHHHHHHH TGCVMIATGAIMWAEKLVQKQQKSGQFKPGLALVKMLNLATFAGLPIALASYFYANRLLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCE VTFVDRENWEIHCFFISWALVALLACFKRDKQTWQRLFLLTALLYGLLPLLNAMTSQYQL EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSNLQRQAYVLAGFDLMMLALAALFYMAAKRLRSSQKVRAAQVTKATAELGIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKDSFFRSMTWLHTWVGLLTCWVLFLVFFAGTAAYYRAEINLWMQPENHGSQYDAHADNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEECCCCCCCCCCCCCCCH QLILKGLTALAQQAPDAETWWVYLPTQRTPLLTYAWSEPAAEGQRFGDYHQGFINPATGE HHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHCCCHHHCCCCCCCCC ALPKARESRGGDFLYRLHFDLYYMSVITARWIVGFCTMFMLVAIISGIVIHKRIFKDFFS CCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRPGKGPRSWLDAHVASSVLALPFHLMITYTGLVTLMFMYMPWGLNTQYGDETQAFYSQW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC KPIYSSSVPSGEAATMQSPQQLLASLNAAMPMSDEAASPIEMLQVEHLNDANARVTVRMS CHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEC PDHSLNQQAPWYRFSAVTGKLTEESTATSAANKTQSTMIALHSGRFAGQGLRLLYLLAGM CCCCCCCCCCCEEEEHHHCCCCCHHHHHHHHCHHHHHEEEEECCCCCCCHHHHHHHHHHH TGCVMIATGAIMWAEKLVQKQQKSGQFKPGLALVKMLNLATFAGLPIALASYFYANRLLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCE VTFVDRENWEIHCFFISWALVALLACFKRDKQTWQRLFLLTALLYGLLPLLNAMTSQYQL EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSNLQRQAYVLAGFDLMMLALAALFYMAAKRLRSSQKVRAAQVTKATAELGIES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA