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The map label for this gene is nolF [H]

Identifier: 160877529

GI number: 160877529

Start: 5233664

End: 5234713

Strand: Direct

Name: nolF [H]

Synonym: Sbal195_4428

Alternate gene names: 160877529

Gene position: 5233664-5234713 (Clockwise)

Preceding gene: 160877528

Following gene: 160877530

Centisome position: 97.88

GC content: 55.71

Gene sequence:

>1050_bases
GTGCGGTATTTAATGATAGGTTTATACCTGCTGTGTTTTGCAGTCCACGCAAGCGCAGTACCTGTAACAGTCGCCTTGCC
CCAAACGGGCAGCACCAATGAACTGTTGACACTCAGTGGCTCCATTAAATCCGCACGGGTGGCTCGCTTATCGGCACGTA
CCGATGGCCTAGTCGCCAAAGTGCTGGTCGATGCGGGCTCCCAAGTCCGCGCAGGCCAGCCTTTACTCGCACTCGACGAT
ACCTTAGCCGTACATCAATTAGCACAGCGTCAAGCTGATGTGATGGCCGCTAAGACCATGCTGGCAGAAAAGCAGCGACT
CCTCACCGAGGCGCAAACACTCAGCGCTCAGCAGTTATTCCCCGAAACGGAGCGCGCGATTCGCCAAGCGGCGTTAACCG
AGGCCGAAGCCAATCTGCAGAGTTTAACGGCAGCACTCGCACACCAAAAAGAGGTGGTCGCCCGCCACCAACTGATGGCG
CCGTTTGCGGGGGTGATTTCAAGCAAACAAACTGAAACCGGTGAGTGGGTTAATGTCGGCACTGAAATCTTCACCTTAGT
GTCCCAAGAGCAGCTCTGGCTCGACATTCAAGTGCCACAGGAAATGTTCCAAAGCGTAGCCACTGCGACTCACGTGGACA
TTGCCGCCGACATGCTGCCTGAACAGCAGTTTATCGGCCATGTGAATGCACTCGTCCCCGTGAGCGACCACAATGCTCGC
AGCTTCTTGGTACGCTTGACTATTCCCGAAGCGGATGGACTTTTGATGCCCGGCACATCAGCCACTGCCACCTTCCACTT
ACAGCGGGCGCAACACAGTGTTGTCGTGCCGCAAGATGCGCTAGTCCGTCACCCCGACGGCCAGTTCAGCGTCTTTACCG
TGCAAAACAACATAGCCCAACGCCATACCGTTCAAGTGGGCCATACGAGCGCCATCGGGATTGAAATCCTCAGTCCATTA
CCCAAAGACGCGCCCGTGGTGATCCGCGGTAACGAGAGCCTACAAGACCAACAGCCAGTCTCTGTACTCAACTCTGCTGT
AGGAGGTTAG

Upstream 100 bases:

>100_bases
TAAGCAAACACTGGCTGGCAACGAGGTTGATAGCGTTTTACACATCACCACCACGAGTTTTATCACTCAGTAACAATCTT
AATAGTGAGATGGAGTTAAC

Downstream 100 bases:

>100_bases
TTAGATGCTGAAGTTTGGAATTAAACATGGCACCTTACTGTCGGTCATAGTCTTGATATTCTGCGTGTTGGGCACGGCTG
CCGCACTGCGTATCCCAATC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRYLMIGLYLLCFAVHASAVPVTVALPQTGSTNELLTLSGSIKSARVARLSARTDGLVAKVLVDAGSQVRAGQPLLALDD
TLAVHQLAQRQADVMAAKTMLAEKQRLLTEAQTLSAQQLFPETERAIRQAALTEAEANLQSLTAALAHQKEVVARHQLMA
PFAGVISSKQTETGEWVNVGTEIFTLVSQEQLWLDIQVPQEMFQSVATATHVDIAADMLPEQQFIGHVNALVPVSDHNAR
SFLVRLTIPEADGLLMPGTSATATFHLQRAQHSVVVPQDALVRHPDGQFSVFTVQNNIAQRHTVQVGHTSAIGIEILSPL
PKDAPVVIRGNESLQDQQPVSVLNSAVGG

Sequences:

>Translated_349_residues
MRYLMIGLYLLCFAVHASAVPVTVALPQTGSTNELLTLSGSIKSARVARLSARTDGLVAKVLVDAGSQVRAGQPLLALDD
TLAVHQLAQRQADVMAAKTMLAEKQRLLTEAQTLSAQQLFPETERAIRQAALTEAEANLQSLTAALAHQKEVVARHQLMA
PFAGVISSKQTETGEWVNVGTEIFTLVSQEQLWLDIQVPQEMFQSVATATHVDIAADMLPEQQFIGHVNALVPVSDHNAR
SFLVRLTIPEADGLLMPGTSATATFHLQRAQHSVVVPQDALVRHPDGQFSVFTVQNNIAQRHTVQVGHTSAIGIEILSPL
PKDAPVVIRGNESLQDQQPVSVLNSAVGG
>Mature_349_residues
MRYLMIGLYLLCFAVHASAVPVTVALPQTGSTNELLTLSGSIKSARVARLSARTDGLVAKVLVDAGSQVRAGQPLLALDD
TLAVHQLAQRQADVMAAKTMLAEKQRLLTEAQTLSAQQLFPETERAIRQAALTEAEANLQSLTAALAHQKEVVARHQLMA
PFAGVISSKQTETGEWVNVGTEIFTLVSQEQLWLDIQVPQEMFQSVATATHVDIAADMLPEQQFIGHVNALVPVSDHNAR
SFLVRLTIPEADGLLMPGTSATATFHLQRAQHSVVVPQDALVRHPDGQFSVFTVQNNIAQRHTVQVGHTSAIGIEILSPL
PKDAPVVIRGNESLQDQQPVSVLNSAVGG

Specific function: Involved in the production of Medicago-specific nodulation signal molecule [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37518; Mature: 37518

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLMIGLYLLCFAVHASAVPVTVALPQTGSTNELLTLSGSIKSARVARLSARTDGLVAK
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHH
VLVDAGSQVRAGQPLLALDDTLAVHQLAQRQADVMAAKTMLAEKQRLLTEAQTLSAQQLF
HHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PETERAIRQAALTEAEANLQSLTAALAHQKEVVARHQLMAPFAGVISSKQTETGEWVNVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
TEIFTLVSQEQLWLDIQVPQEMFQSVATATHVDIAADMLPEQQFIGHVNALVPVSDHNAR
HHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCE
SFLVRLTIPEADGLLMPGTSATATFHLQRAQHSVVVPQDALVRHPDGQFSVFTVQNNIAQ
EEEEEEEECCCCCEEECCCCCEEEEEEECCCCCEECCCHHHEECCCCCEEEEEEECCCCH
RHTVQVGHTSAIGIEILSPLPKDAPVVIRGNESLQDQQPVSVLNSAVGG
HHEEEECCCCEEHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRYLMIGLYLLCFAVHASAVPVTVALPQTGSTNELLTLSGSIKSARVARLSARTDGLVAK
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHH
VLVDAGSQVRAGQPLLALDDTLAVHQLAQRQADVMAAKTMLAEKQRLLTEAQTLSAQQLF
HHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PETERAIRQAALTEAEANLQSLTAALAHQKEVVARHQLMAPFAGVISSKQTETGEWVNVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
TEIFTLVSQEQLWLDIQVPQEMFQSVATATHVDIAADMLPEQQFIGHVNALVPVSDHNAR
HHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCE
SFLVRLTIPEADGLLMPGTSATATFHLQRAQHSVVVPQDALVRHPDGQFSVFTVQNNIAQ
EEEEEEEECCCCCEEECCCCCEEEEEEECCCCCEECCCHHHEECCCCCEEEEEEECCCCH
RHTVQVGHTSAIGIEILSPLPKDAPVVIRGNESLQDQQPVSVLNSAVGG
HHEEEECCCCEEHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]