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The map label for this gene is pilQ [H]

Identifier: 160877305

GI number: 160877305

Start: 4966767

End: 4968818

Strand: Reverse

Name: pilQ [H]

Synonym: Sbal195_4203

Alternate gene names: 160877305

Gene position: 4968818-4966767 (Counterclockwise)

Preceding gene: 160877306

Following gene: 160877304

Centisome position: 92.92

GC content: 43.91

Gene sequence:

>2052_bases
ATGAAATCTTCTGCCGCGATAAAAGTCCCGTTAATTTCTTCAGGCTTAATCAAGTCTGTTATAGGGATCGCACTGGTATT
TGGAATTTTGCCATCGAGTTTTGCGGCAAATCGATTAATGGATGTTAAATACCATGCTTTGGTTGATCATCAATTGGAGC
TCGAGCTGGTCTTTGAAGAGGCGGTCGCTCCGCCTTCAATAGATTCAAATGCCTCGCCCGCAGAGCTAGTGCTGACCTTC
GATAACACTATCTCAGGTTTATCTAAGGATCGTTTACCTATTAATCAGGTTGGGGTGACAGACATCACCACTGAGCAGCA
AGATACTCGTCTTAAAGTCATCTTAGGTATGTCCAAAGTGAAACCTTACCAAGGTTCTGTCATGGGCAATTCATATCGAT
TAACAATCAACGATGAAGTGGCGGGTACTCAAGCCCAAGCTGAAAACCCTTTCGTTAATAGCATTAAAAATATCGATTTT
CGTCGTAATGATAATGGTGGCGGTGAGCTATTAGTCTATCTAAATAATCGCTCGGTTGCGGCTAATGTCGAGCAAGTGGG
CGCTAAGCTCGAAGTGAAGTTATATAACACAGATATTAATAACGATCTTCTGTATGTTATGGATGTGAAAGATTTCTCCA
CGCCAGTAAAAAGCTTCGAGACATTTAAAGAAGATTTAACGGCGCGTATTGTCGTCGATATTACGGGTGAGTATGAATTC
ACTTACAAGCAAGAAGATAACCTCTTTAGACTCTCAATGAATAAAGTCGAGAGGGCCGCCGCCAAGAAAGATGTTAAAAA
ATACAATGGCCGGACTTTGTCGCTTAACTTCCAAAATATCCCAGTGCGCACTGTGTTGCAGATCATCGCCGACTATAATA
ACTTTAACTTAGTCACCAGCGATACTGTGGAAGGCAATATCACCTTAAGATTGGACGATGTGCCTTGGGATCAAGCTTTA
GAATTAATTCTGCAAACCAAAGGATTAGATAAGCGTATCGAAGGTAACATCTTAATGGTGGCGCCGAGCGAAGAACTGGC
AATTCGTGAAAGCCAGAACCTCAAAAACAAACAAGAGGTTAAAGAGTTAGCACCGCTCTATTCTGAGTACTTGCAAATTA
ACTACGCTAAAGCGGTCGATATTGCTGAGTTATTGAAAAGCGCGGATTCAAGCTTACTTTCACCACGCGGTTCAGTCGCG
GTCGATGAACGTACTAACACAGTGTTAGTGAAAGATACGGCTGAAACGATTGAGAACATTCACCGTTTAGTCGAAGTGCT
CGATATCCCCATCCGCCAAGTGTTGATCGAGTCACGTATGGTGACAGTGAAAGACGATGTCTCCGAAGACTTAGGTATTC
GTTGGGGCGTCACAGATCAGCAGGGTAGTAAGGGAACCTCAGGCACATTAGAAGGTGCACAGAGTATTGCCAATGGGATT
ATTCCTACTCCCGATCAGCGTTTGAACGTTAACTTACCCGCGGCAGCCACCAATCCAGCGAGTATTGCCTTCCATGTCGC
TAAATTGGCGGACGGTACCATTCTTGATTTGGAATTAAGTGCGCTAGAGCAAGAAAACAAAGGTGAAATCATCGCTAGCC
CTCGTATTACCACCTCTAACCAAAAGGCGGCTTATATTGAGCAAGGTGTCGAGATCCCTTATGTGCAGTCGACTTCGAGT
GGTGCAACGTCAGTCACGTTTAAGAAGGCGGTGTTGTCTCTACGGGTTACACCCCAAATTACGCCTGATAACCGAGTCAT
TTTAGATTTAGAAATCACTCAAGATTCTCAGGGTAAAACCGTTGATACTCCAACGGGTCCCGCAGTTGCCATCGATACTC
AACGCATCGGCACCCAAGTGCTCGTTAATAACGGCGAAACCATAGTGCTTGGCGGTATTTATCAGCAAAATCTGATCAGC
CGTGTGAGTAAAGTACCAATTCTAGGTGATATTCCCTTGGTAGGTTTCCTGTTTAGGAACACAACAGACAAAAATGAGCG
TCAAGAGCTACTTATTTTTGTCACCCCAAAAATAGTCGGTGAGAAGATCTAA

Upstream 100 bases:

>100_bases
CGAAGTAGTAGAATTAATTCCAGATGGTTCTGGTTGTTGGTCCGAAAGGACAAGCAATTTAGAACTTTCTGGAGAATAAC
GAGCGAAGGATGAGGGAATA

Downstream 100 bases:

>100_bases
GCACTTGCTATGTATCGACTAAAGCCAGCAGTTATTGCTGGCTTTATTATTACTGTTATACAATTCTTTGCATAAATAGC
GCACATGGCTTGCCATAGTA

Product: type IV pilus secretin PilQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MKSSAAIKVPLISSGLIKSVIGIALVFGILPSSFAANRLMDVKYHALVDHQLELELVFEEAVAPPSIDSNASPAELVLTF
DNTISGLSKDRLPINQVGVTDITTEQQDTRLKVILGMSKVKPYQGSVMGNSYRLTINDEVAGTQAQAENPFVNSIKNIDF
RRNDNGGGELLVYLNNRSVAANVEQVGAKLEVKLYNTDINNDLLYVMDVKDFSTPVKSFETFKEDLTARIVVDITGEYEF
TYKQEDNLFRLSMNKVERAAAKKDVKKYNGRTLSLNFQNIPVRTVLQIIADYNNFNLVTSDTVEGNITLRLDDVPWDQAL
ELILQTKGLDKRIEGNILMVAPSEELAIRESQNLKNKQEVKELAPLYSEYLQINYAKAVDIAELLKSADSSLLSPRGSVA
VDERTNTVLVKDTAETIENIHRLVEVLDIPIRQVLIESRMVTVKDDVSEDLGIRWGVTDQQGSKGTSGTLEGAQSIANGI
IPTPDQRLNVNLPAAATNPASIAFHVAKLADGTILDLELSALEQENKGEIIASPRITTSNQKAAYIEQGVEIPYVQSTSS
GATSVTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPTGPAVAIDTQRIGTQVLVNNGETIVLGGIYQQNLIS
RVSKVPILGDIPLVGFLFRNTTDKNERQELLIFVTPKIVGEKI

Sequences:

>Translated_683_residues
MKSSAAIKVPLISSGLIKSVIGIALVFGILPSSFAANRLMDVKYHALVDHQLELELVFEEAVAPPSIDSNASPAELVLTF
DNTISGLSKDRLPINQVGVTDITTEQQDTRLKVILGMSKVKPYQGSVMGNSYRLTINDEVAGTQAQAENPFVNSIKNIDF
RRNDNGGGELLVYLNNRSVAANVEQVGAKLEVKLYNTDINNDLLYVMDVKDFSTPVKSFETFKEDLTARIVVDITGEYEF
TYKQEDNLFRLSMNKVERAAAKKDVKKYNGRTLSLNFQNIPVRTVLQIIADYNNFNLVTSDTVEGNITLRLDDVPWDQAL
ELILQTKGLDKRIEGNILMVAPSEELAIRESQNLKNKQEVKELAPLYSEYLQINYAKAVDIAELLKSADSSLLSPRGSVA
VDERTNTVLVKDTAETIENIHRLVEVLDIPIRQVLIESRMVTVKDDVSEDLGIRWGVTDQQGSKGTSGTLEGAQSIANGI
IPTPDQRLNVNLPAAATNPASIAFHVAKLADGTILDLELSALEQENKGEIIASPRITTSNQKAAYIEQGVEIPYVQSTSS
GATSVTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPTGPAVAIDTQRIGTQVLVNNGETIVLGGIYQQNLIS
RVSKVPILGDIPLVGFLFRNTTDKNERQELLIFVTPKIVGEKI
>Mature_683_residues
MKSSAAIKVPLISSGLIKSVIGIALVFGILPSSFAANRLMDVKYHALVDHQLELELVFEEAVAPPSIDSNASPAELVLTF
DNTISGLSKDRLPINQVGVTDITTEQQDTRLKVILGMSKVKPYQGSVMGNSYRLTINDEVAGTQAQAENPFVNSIKNIDF
RRNDNGGGELLVYLNNRSVAANVEQVGAKLEVKLYNTDINNDLLYVMDVKDFSTPVKSFETFKEDLTARIVVDITGEYEF
TYKQEDNLFRLSMNKVERAAAKKDVKKYNGRTLSLNFQNIPVRTVLQIIADYNNFNLVTSDTVEGNITLRLDDVPWDQAL
ELILQTKGLDKRIEGNILMVAPSEELAIRESQNLKNKQEVKELAPLYSEYLQINYAKAVDIAELLKSADSSLLSPRGSVA
VDERTNTVLVKDTAETIENIHRLVEVLDIPIRQVLIESRMVTVKDDVSEDLGIRWGVTDQQGSKGTSGTLEGAQSIANGI
IPTPDQRLNVNLPAAATNPASIAFHVAKLADGTILDLELSALEQENKGEIIASPRITTSNQKAAYIEQGVEIPYVQSTSS
GATSVTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPTGPAVAIDTQRIGTQVLVNNGETIVLGGIYQQNLIS
RVSKVPILGDIPLVGFLFRNTTDKNERQELLIFVTPKIVGEKI

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=421, Percent_Identity=38.0047505938242, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI87082242, Length=376, Percent_Identity=30.5851063829787, Blast_Score=130, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 74931; Mature: 74931

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSAAIKVPLISSGLIKSVIGIALVFGILPSSFAANRLMDVKYHALVDHQLELELVFEE
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHEECEEEEEEECCCEEEEEEEEH
AVAPPSIDSNASPAELVLTFDNTISGLSKDRLPINQVGVTDITTEQQDTRLKVILGMSKV
HCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEHHHC
KPYQGSVMGNSYRLTINDEVAGTQAQAENPFVNSIKNIDFRRNDNGGGELLVYLNNRSVA
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCEEEEEECCCCEE
ANVEQVGAKLEVKLYNTDINNDLLYVMDVKDFSTPVKSFETFKEDLTARIVVDITGEYEF
CCHHHCCCEEEEEEEECCCCCCEEEEEECCHHCCHHHHHHHHHHCCEEEEEEEEECCEEE
TYKQEDNLFRLSMNKVERAAAKKDVKKYNGRTLSLNFQNIPVRTVLQIIADYNNFNLVTS
EEECCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEC
DTVEGNITLRLDDVPWDQALELILQTKGLDKRIEGNILMVAPSEELAIRESQNLKNKQEV
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHEEECCCCCCCHHHH
KELAPLYSEYLQINYAKAVDIAELLKSADSSLLSPRGSVAVDERTNTVLVKDTAETIENI
HHHHHHHHHHHEEEHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCEEEEECHHHHHHHH
HRLVEVLDIPIRQVLIESRMVTVKDDVSEDLGIRWGVTDQQGSKGTSGTLEGAQSIANGI
HHHHHHHHCHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCC
IPTPDQRLNVNLPAAATNPASIAFHVAKLADGTILDLELSALEQENKGEIIASPRITTSN
CCCCCCCEEEECCCCCCCCCHHEEEEEHHCCCEEEEEEHHHHCCCCCCCEEECCEEECCC
QKAAYIEQGVEIPYVQSTSSGATSVTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKT
CCHHHHHCCCCCCEEECCCCCCCEEEEEEEEEEEEECCEECCCCEEEEEEEECCCCCCCE
VDTPTGPAVAIDTQRIGTQVLVNNGETIVLGGIYQQNLISRVSKVPILGDIPLVGFLFRN
ECCCCCCEEEEEHHHCCEEEEEECCCEEEECCHHHHHHHHHHHCCCCEECCCHHHHEECC
TTDKNERQELLIFVTPKIVGEKI
CCCCCCCCEEEEEECCHHCCCCC
>Mature Secondary Structure
MKSSAAIKVPLISSGLIKSVIGIALVFGILPSSFAANRLMDVKYHALVDHQLELELVFEE
CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHEECEEEEEEECCCEEEEEEEEH
AVAPPSIDSNASPAELVLTFDNTISGLSKDRLPINQVGVTDITTEQQDTRLKVILGMSKV
HCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEHHHC
KPYQGSVMGNSYRLTINDEVAGTQAQAENPFVNSIKNIDFRRNDNGGGELLVYLNNRSVA
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCEEEEEECCCCEE
ANVEQVGAKLEVKLYNTDINNDLLYVMDVKDFSTPVKSFETFKEDLTARIVVDITGEYEF
CCHHHCCCEEEEEEEECCCCCCEEEEEECCHHCCHHHHHHHHHHCCEEEEEEEEECCEEE
TYKQEDNLFRLSMNKVERAAAKKDVKKYNGRTLSLNFQNIPVRTVLQIIADYNNFNLVTS
EEECCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEC
DTVEGNITLRLDDVPWDQALELILQTKGLDKRIEGNILMVAPSEELAIRESQNLKNKQEV
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHEEECCCCCCCHHHH
KELAPLYSEYLQINYAKAVDIAELLKSADSSLLSPRGSVAVDERTNTVLVKDTAETIENI
HHHHHHHHHHHEEEHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCEEEEECHHHHHHHH
HRLVEVLDIPIRQVLIESRMVTVKDDVSEDLGIRWGVTDQQGSKGTSGTLEGAQSIANGI
HHHHHHHHCHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCC
IPTPDQRLNVNLPAAATNPASIAFHVAKLADGTILDLELSALEQENKGEIIASPRITTSN
CCCCCCCEEEECCCCCCCCCHHEEEEEHHCCCEEEEEEHHHHCCCCCCCEEECCEEECCC
QKAAYIEQGVEIPYVQSTSSGATSVTFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKT
CCHHHHHCCCCCCEEECCCCCCCEEEEEEEEEEEEECCEECCCCEEEEEEEECCCCCCCE
VDTPTGPAVAIDTQRIGTQVLVNNGETIVLGGIYQQNLISRVSKVPILGDIPLVGFLFRN
ECCCCCCEEEEEHHHCCEEEEEECCCEEEECCHHHHHHHHHHHCCCCEECCCHHHHEECC
TTDKNERQELLIFVTPKIVGEKI
CCCCCCCCEEEEEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]