| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877302
Identifier: 160877302
GI number: 160877302
Start: 4963479
End: 4964930
Strand: Reverse
Name: 160877302
Synonym: Sbal195_4200
Alternate gene names: NA
Gene position: 4964930-4963479 (Counterclockwise)
Preceding gene: 160877303
Following gene: 160877301
Centisome position: 92.85
GC content: 47.66
Gene sequence:
>1452_bases GTGACGTTTCAAGGTTCTGTCTTGCTTCCTTCTCAGGAGGCCCTCATACAAAGAATGCATCATGTTGCCAGTTATAGCGA TCAGCTACTGGTGCTTTCTGGTGTCAGCGGTTCAGGCAAAACCACCTTAGTGACCGGATTAGCGACCGATTTTGACGAGT CAAATGCGGCATTTGTGATTTGTCCTATGCATGCCGATAACGCTGAAATCCGCCGTAAAATTCTGGTTCAGTTAATTTCA TCCCCGATTTTTGACGACGATATTCCCCTCGCCGATACCCTGTTGCGGCTTGCTAGCACGCAAACTAAACCCTTACATAT CATTATCGATGATGCGCATTTATTGCCTAAGGCTTTGTGGGCTGAGTGCATTATTCTCAATCAAATTCAGTGTGCGGGTA AGAATATTGCCGTCACACTCACTGTTCCACCGGCATTTTTAGCAGATCTACTTCCACAATTACCGGAGCAGTTACGGCGG CAGATATTGCCTATCAGTATTGAGCCGTTAACCATGCCTGAGCGTGAGGCCTTGTATCAAACGCTACTGAGATACAGCGA ACAAAATCCTTTTACGCCAAGGGAAATTGTGCGCAGTCAGCTTGAGAAGCAAACCGGTACGCCGCAGGAAGTGGTTAATT TATTAGATAAAGCCTTGCATAGCGCGCCTGAGAAGACATCTTCCTTGGTGAAATATAAAGCTGTGATGGTGACTGCTGTG AGTATGTTACTCGCCTTAGGCATTTGGTTTGGCGTTACTCAGCCTTTTTCTGAGGAGCAAGCCTTAGAGGCTGCGACTTA TCCTGCGATAGATTCACCCGCCTTTTTGTCCTACGGGCAAAAAGTCTTAACGCCGTATTTTACGCTGCGCGCTGAGCAAC TGAAGCTCGCCGCGGAGACTGCGAAAGTTATTGAAATAGAGACGGCAGAAGAAGCCAAAACTGAACAAGCCGTCGATCCC TTAAGTGAATTCCACGGTGAAGCGCCACATCCCATGCCTGACGATGCTGCCTTAGTGAGTGTGGGTGAAGTGAGTAGCAA GTCTTTTGGTGAGGATAAGCCGCCTGAGGATACTGAACCACAAGCTAAAGCGGCTCAGACTCAACCCGCAACCATTGATG CTGCAAAGGCCGATAAGCCGGTAGCTAAAGCGGGCTTGGATACGCAAAAGCCGCTCAAAGGTTACACAATACAGATTGCC AGTGTTGCTCAGTTGGATACCCTGCGTGCAACATTAAAGAGTATTGAGCATCTTGAGGGCGTTCGCGTTGCACAACATAA GCAGCGTTGGGTTGTCCTCGTTGGCAACTACGGTAGTAGCAAGTCAGCTTCGAATGCGGCGGCACAATTGGTTAAAGAGT ATCGTTTCGAGCAGCCTTGGGTAAGAAAGTGGGCGGATTTAAAAGATTATCAACTAGAAGAAAGTCTGCCAAATCGTGAA ATTTCAGAATAA
Upstream 100 bases:
>100_bases GCTCCCAACGGCAATAGGCCGCGCGGATGTGTTTAGTCAAGTCACAGAATCTACCCTTGAACAGGTTATTCGCTGCGCAT AAACACTGTATGGTGGGCGA
Downstream 100 bases:
>100_bases ACAGAGTACAATCATGGCCTTTATTTTTGTCGGCATTCATCAAGTTAAATGATAAAAAAACACAGAGCCTTCCTTAAGTG GGCTGGCGGTAAATTTAAAT
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: DamX Domain-Containing Protein; Sporulation Domain Protein; Sporulation
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVICPMHADNAEIRRKILVQLIS SPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALWAECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRR QILPISIEPLTMPEREALYQTLLRYSEQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV SMLLALGIWFGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLTPYFTLRAEQLKLAAETAKVIEIETAEEAKTEQAVDP LSEFHGEAPHPMPDDAALVSVGEVSSKSFGEDKPPEDTEPQAKAAQTQPATIDAAKADKPVAKAGLDTQKPLKGYTIQIA SVAQLDTLRATLKSIEHLEGVRVAQHKQRWVVLVGNYGSSKSASNAAAQLVKEYRFEQPWVRKWADLKDYQLEESLPNRE ISE
Sequences:
>Translated_483_residues MTFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVICPMHADNAEIRRKILVQLIS SPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALWAECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRR QILPISIEPLTMPEREALYQTLLRYSEQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV SMLLALGIWFGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLTPYFTLRAEQLKLAAETAKVIEIETAEEAKTEQAVDP LSEFHGEAPHPMPDDAALVSVGEVSSKSFGEDKPPEDTEPQAKAAQTQPATIDAAKADKPVAKAGLDTQKPLKGYTIQIA SVAQLDTLRATLKSIEHLEGVRVAQHKQRWVVLVGNYGSSKSASNAAAQLVKEYRFEQPWVRKWADLKDYQLEESLPNRE ISE >Mature_482_residues TFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVICPMHADNAEIRRKILVQLISS PIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALWAECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRRQ ILPISIEPLTMPEREALYQTLLRYSEQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAVS MLLALGIWFGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLTPYFTLRAEQLKLAAETAKVIEIETAEEAKTEQAVDPL SEFHGEAPHPMPDDAALVSVGEVSSKSFGEDKPPEDTEPQAKAAQTQPATIDAAKADKPVAKAGLDTQKPLKGYTIQIAS VAQLDTLRATLKSIEHLEGVRVAQHKQRWVVLVGNYGSSKSASNAAAQLVKEYRFEQPWVRKWADLKDYQLEESLPNREI SE
Specific function: Unknown
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53081; Mature: 52950
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVI CCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEE CPMHADNAEIRRKILVQLISSPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALW EECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH AECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRRQILPISIEPLTMPEREALYQ HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH TLLRYSEQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SMLLALGIWFGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLTPYFTLRAEQLKLAAET HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH AKVIEIETAEEAKTEQAVDPLSEFHGEAPHPMPDDAALVSVGEVSSKSFGEDKPPEDTEP HHEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCC QAKAAQTQPATIDAAKADKPVAKAGLDTQKPLKGYTIQIASVAQLDTLRATLKSIEHLEG HHHHCCCCCCEEEHHCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC VRVAQHKQRWVVLVGNYGSSKSASNAAAQLVKEYRFEQPWVRKWADLKDYQLEESLPNRE HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCCCCC ISE CCC >Mature Secondary Structure TFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVI CCCCCEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEE CPMHADNAEIRRKILVQLISSPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALW EECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH AECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRRQILPISIEPLTMPEREALYQ HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH TLLRYSEQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SMLLALGIWFGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLTPYFTLRAEQLKLAAET HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH AKVIEIETAEEAKTEQAVDPLSEFHGEAPHPMPDDAALVSVGEVSSKSFGEDKPPEDTEP HHEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCC QAKAAQTQPATIDAAKADKPVAKAGLDTQKPLKGYTIQIASVAQLDTLRATLKSIEHLEG HHHHCCCCCCEEEHHCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCC VRVAQHKQRWVVLVGNYGSSKSASNAAAQLVKEYRFEQPWVRKWADLKDYQLEESLPNRE HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCCCCC ISE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA