| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160877294
Identifier: 160877294
GI number: 160877294
Start: 4957102
End: 4957986
Strand: Reverse
Name: 160877294
Synonym: Sbal195_4191
Alternate gene names: NA
Gene position: 4957986-4957102 (Counterclockwise)
Preceding gene: 160877296
Following gene: 160877289
Centisome position: 92.72
GC content: 45.65
Gene sequence:
>885_bases ATGCAACGTTCAGTTGTTATCGGTTTGATTTTATTGATAGTAGGTAATCTATTCAGTGCCTTCTATGATGTGTCGATCAA GTGGTTGCCGGACGATGCAAATGCCTCGACTTTCCTCCTTGTCAGGCAAATCTCCTCAGTCTTTATGCTGTTGCCAGTGT GGCTGTATTCACAGCGGCCAATGACAACACATATTTCAGTTCACCTTTGGCGTGCCAACATAGGCTCAGTTGGCGCGCTT TTTTTAATTATTGGCTTGATGGCATTGCCACTCGCGACGGTTAGCTCGTTGTTTTATTCGGCGCCTTTGATGATCATCTT GATGGGGTATTTTTTCCTGAGAGAGAGGATCACAGCCGCCCAGACCATCTGCACAGGCTTAGGTTTTGTCGGTATTTTGA TTATCCTGCGACCGAGTGAAATGAACTGGTATGGCATTGCTGTGCTATTTTCGGCTTTTACCTTTGCGGTGAATCAGTTA GCGCTGAAAAAAGTGCCTAATGCAGAGCATCCCGTGTTAACGCTGATGTTGTATAACTTGCTGGGTATTCCTGCGACGTT AGTAATTGCGGCGTTTCAGGGCATCGAAGGTTTGAGTTGGGAGCTGGTGGGCGTGGCATTGCTGAGCAATGCATTTTTAC TTGTGTATCATTGGTTTTGCGTGCTGGCCTACCGTAAAGCACAGGCGAGCGATATCGCGATTGCGGAATATAGTGGCTTG TTATTTATTGTCTTTTTAGGCTGGTTATTATTCGATGAATGGTTGGATAATTTAAGCTGGCTTGGCGCCGCTTTGATTGT GTTGCCTTCGTTGTTTTTACCTTGGCTAGGGTCGTTGTTATCAAAATCGACACCTAAGATAGCGGATACGCTAGCGGGGA AATAA
Upstream 100 bases:
>100_bases TTTAGTATGAATTTAATTCATCTAGCATGAGAAAGCATCATTTCAGCTTAAGTTTTGGGAGGATTATCATGCCGCCATTG AGATTTATGGATGTTAAAAA
Downstream 100 bases:
>100_bases CGCTGAGCGTTTAAGCCTAAGTGTACGAGTTGACTCGCGACTTAGGCTTAACTTCCACTACGCTCAAATTACAACCTGCT CAAATTGTAAAATCACTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MQRSVVIGLILLIVGNLFSAFYDVSIKWLPDDANASTFLLVRQISSVFMLLPVWLYSQRPMTTHISVHLWRANIGSVGAL FLIIGLMALPLATVSSLFYSAPLMIILMGYFFLRERITAAQTICTGLGFVGILIILRPSEMNWYGIAVLFSAFTFAVNQL ALKKVPNAEHPVLTLMLYNLLGIPATLVIAAFQGIEGLSWELVGVALLSNAFLLVYHWFCVLAYRKAQASDIAIAEYSGL LFIVFLGWLLFDEWLDNLSWLGAALIVLPSLFLPWLGSLLSKSTPKIADTLAGK
Sequences:
>Translated_294_residues MQRSVVIGLILLIVGNLFSAFYDVSIKWLPDDANASTFLLVRQISSVFMLLPVWLYSQRPMTTHISVHLWRANIGSVGAL FLIIGLMALPLATVSSLFYSAPLMIILMGYFFLRERITAAQTICTGLGFVGILIILRPSEMNWYGIAVLFSAFTFAVNQL ALKKVPNAEHPVLTLMLYNLLGIPATLVIAAFQGIEGLSWELVGVALLSNAFLLVYHWFCVLAYRKAQASDIAIAEYSGL LFIVFLGWLLFDEWLDNLSWLGAALIVLPSLFLPWLGSLLSKSTPKIADTLAGK >Mature_294_residues MQRSVVIGLILLIVGNLFSAFYDVSIKWLPDDANASTFLLVRQISSVFMLLPVWLYSQRPMTTHISVHLWRANIGSVGAL FLIIGLMALPLATVSSLFYSAPLMIILMGYFFLRERITAAQTICTGLGFVGILIILRPSEMNWYGIAVLFSAFTFAVNQL ALKKVPNAEHPVLTLMLYNLLGIPATLVIAAFQGIEGLSWELVGVALLSNAFLLVYHWFCVLAYRKAQASDIAIAEYSGL LFIVFLGWLLFDEWLDNLSWLGAALIVLPSLFLPWLGSLLSKSTPKIADTLAGK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32490; Mature: 32490
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSVVIGLILLIVGNLFSAFYDVSIKWLPDDANASTFLLVRQISSVFMLLPVWLYSQRP CCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC MTTHISVHLWRANIGSVGALFLIIGLMALPLATVSSLFYSAPLMIILMGYFFLRERITAA CEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTICTGLGFVGILIILRPSEMNWYGIAVLFSAFTFAVNQLALKKVPNAEHPVLTLMLYNL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LGIPATLVIAAFQGIEGLSWELVGVALLSNAFLLVYHWFCVLAYRKAQASDIAIAEYSGL HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH LFIVFLGWLLFDEWLDNLSWLGAALIVLPSLFLPWLGSLLSKSTPKIADTLAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MQRSVVIGLILLIVGNLFSAFYDVSIKWLPDDANASTFLLVRQISSVFMLLPVWLYSQRP CCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC MTTHISVHLWRANIGSVGALFLIIGLMALPLATVSSLFYSAPLMIILMGYFFLRERITAA CEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTICTGLGFVGILIILRPSEMNWYGIAVLFSAFTFAVNQLALKKVPNAEHPVLTLMLYNL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LGIPATLVIAAFQGIEGLSWELVGVALLSNAFLLVYHWFCVLAYRKAQASDIAIAEYSGL HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH LFIVFLGWLLFDEWLDNLSWLGAALIVLPSLFLPWLGSLLSKSTPKIADTLAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA