| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877284
Identifier: 160877284
GI number: 160877284
Start: 4949117
End: 4949821
Strand: Reverse
Name: 160877284
Synonym: Sbal195_4181
Alternate gene names: NA
Gene position: 4949821-4949117 (Counterclockwise)
Preceding gene: 160877286
Following gene: 160877281
Centisome position: 92.57
GC content: 42.41
Gene sequence:
>705_bases ATGAGTGAAAATATTGAAGCGGCTCAAAGTGATAAAACAAATCATCCAATCAAGCACAAATTAAGAGTAGGTATTTTCCT TTATCCCGGCATGACGATGCTCGATGCCTATGGGCCACTACAGTTTTTAGCCTTTGTGCCATCTTTTGAAACCTTCACTT TTGCGAAAACCAGCATGCTATTACCCTGTGATGCGGGCGTTAACTTACAACCTAATTACGATTTCGATAATTGTCCGCCG ATAGATATCCTTTTAGTGCCTGGGAGCGCAAATCCTTTGGCGCAAATACAGGATGAGAAAGTCATTTCTTTCTTAAAATG CAAGGGGGAGCAAGCGCAATACATTACATCTGTATGCACTGGTGCCTTGATTCTTGCGGCAACAGGTTTACTTAATGGTT ATCGCACGACCACTCACTGGGCTTATGCTTCAGTGTTGGAACAATATCCTCAAATTACCTTTGAAAATAAACGTATTGTG ATTGACCGTAATCGGATCAGTGGCGGCGGTATTACTGCAGGGCTCGATTTTGCTTTGGCACTCATTGCCAATATAGAGGG TGAACAACAGGCTAAAACACTGCAGTTATTGTTTGAATATGATCCTAAACCTCCCTTTAATTGTGGCTCACCTATATTGG CTGATGCTCTTTTGGTACAGAGGGTTGAACAGGAGGTCAGGCAGATAGCGTCAGGATTATTTTAG
Upstream 100 bases:
>100_bases TGGTTAGGAATAATGGGCTTTATAGTGACGGTCATAGGGTTAACTGCAACGACAGTGTTACCTGAAATATGAAATTGTCA CTACCGATGGAGAATCTGTG
Downstream 100 bases:
>100_bases GCCACAAGGCGCCAAGGATTATTTTAAAAAGTACATAGTTCATACGATTATTATGTACCTTAGGTTTAAAAACTGCTTTT CACTAGGAATCGCCATTCCC
Product: ThiJ/PfpI domain-containing protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ/PfpI; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; Transcriptional Regulatory Protein; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSENIEAAQSDKTNHPIKHKLRVGIFLYPGMTMLDAYGPLQFLAFVPSFETFTFAKTSMLLPCDAGVNLQPNYDFDNCPP IDILLVPGSANPLAQIQDEKVISFLKCKGEQAQYITSVCTGALILAATGLLNGYRTTTHWAYASVLEQYPQITFENKRIV IDRNRISGGGITAGLDFALALIANIEGEQQAKTLQLLFEYDPKPPFNCGSPILADALLVQRVEQEVRQIASGLF
Sequences:
>Translated_234_residues MSENIEAAQSDKTNHPIKHKLRVGIFLYPGMTMLDAYGPLQFLAFVPSFETFTFAKTSMLLPCDAGVNLQPNYDFDNCPP IDILLVPGSANPLAQIQDEKVISFLKCKGEQAQYITSVCTGALILAATGLLNGYRTTTHWAYASVLEQYPQITFENKRIV IDRNRISGGGITAGLDFALALIANIEGEQQAKTLQLLFEYDPKPPFNCGSPILADALLVQRVEQEVRQIASGLF >Mature_233_residues SENIEAAQSDKTNHPIKHKLRVGIFLYPGMTMLDAYGPLQFLAFVPSFETFTFAKTSMLLPCDAGVNLQPNYDFDNCPPI DILLVPGSANPLAQIQDEKVISFLKCKGEQAQYITSVCTGALILAATGLLNGYRTTTHWAYASVLEQYPQITFENKRIVI DRNRISGGGITAGLDFALALIANIEGEQQAKTLQLLFEYDPKPPFNCGSPILADALLVQRVEQEVRQIASGLF
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25732; Mature: 25601
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENIEAAQSDKTNHPIKHKLRVGIFLYPGMTMLDAYGPLQFLAFVPSFETFTFAKTSML CCCCCCCHHCCCCCCCCCEEEEEEEEEECCHHHHHHCCHHHHHHHCCCCCCEEEECCEEE LPCDAGVNLQPNYDFDNCPPIDILLVPGSANPLAQIQDEKVISFLKCKGEQAQYITSVCT EECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH GALILAATGLLNGYRTTTHWAYASVLEQYPQITFENKRIVIDRNRISGGGITAGLDFALA HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCHHHHHHHH LIANIEGEQQAKTLQLLFEYDPKPPFNCGSPILADALLVQRVEQEVRQIASGLF HHHCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SENIEAAQSDKTNHPIKHKLRVGIFLYPGMTMLDAYGPLQFLAFVPSFETFTFAKTSML CCCCCCHHCCCCCCCCCEEEEEEEEEECCHHHHHHCCHHHHHHHCCCCCCEEEECCEEE LPCDAGVNLQPNYDFDNCPPIDILLVPGSANPLAQIQDEKVISFLKCKGEQAQYITSVCT EECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH GALILAATGLLNGYRTTTHWAYASVLEQYPQITFENKRIVIDRNRISGGGITAGLDFALA HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCHHHHHHHH LIANIEGEQQAKTLQLLFEYDPKPPFNCGSPILADALLVQRVEQEVRQIASGLF HHHCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA