| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877225
Identifier: 160877225
GI number: 160877225
Start: 4878065
End: 4879036
Strand: Reverse
Name: 160877225
Synonym: Sbal195_4121
Alternate gene names: NA
Gene position: 4879036-4878065 (Counterclockwise)
Preceding gene: 160877227
Following gene: 160877224
Centisome position: 91.24
GC content: 39.71
Gene sequence:
>972_bases ATGAACAAAGCCTTACCGCTTATTTTTGTCATGTGTGCTTCTCTAACAACCGCTTGTGCAACTGTCAATAAGAAACAAGT CGTCACCACTGCGCAACCTGCTGCAGCAATAAGCGCGACACAAACGGAAGTGGCCTTAAATACCAAGTTATTAAAACGCA AAGTTGCCATTGGCCGATTCACTAATGAGACCACGTACGGTCAAGGCTTTTTCATTGATGAAGACAATAATCGTATCGGT AAGCAAGCAATGGATATTTTGTCTTCGAAACTATTTCAAACGGGCAAGTTTATTATGCTCGAAAGAGCCGATCTTGGAAA AATTGAAAAAGAGCTTGCGATGGGAGGGAACTCAACACTTAAAAATGCAGCAGATTATCTGATCGTAGGTTCTATCACCG AGTTTGGCCGTAAAGAAGTTAGCGATGTAGGTGTTTTTTCAAGAGTAAAAAAACAAGAAGCAAATGCTAAAGTGAACATC CGCATTGTAGATGTTGCAACGGGTCTAATCATCTACTCTGAAGAAGGTAAAGGTATCGCCTATTCAGAAGCTGGCTCTGT GATGGGCGTGGGTGACAAGGCTGGCTATGATAGCTCGCTGAACGATAAAGTGTTAGATGTTGCGATCACTAATCTTGCCT CAAATATCATTGAAAACATGTTAGACAAACCTTGGCAGTCATATATTTTATCTTATGAAGAAGGTAGCTTAATTATCTCT GGAGGAAGTTCGCAAAACATCACACCTGGTACCCTATTTGAGATCATCAAAGAAGGTAAAAAAGTAAAAAACCCACAAAC AGGTATGTTCATTACATTACCAGGCAAAGCAATTGGGACCATTGAAGTGACTGCTTCATTTGGTAATACACCGGAGTCAG AAGTGTCTTTTGGTACGATAGTCAGTGGCAATCTTGATCAATATATAAAAGATCAAGATTACACGGGCTTATTTATTCAA GAAATGAAATAA
Upstream 100 bases:
>100_bases GAATAAAGTGAAAAAATCACCATTTGAATATTCACAGATAGACCCGTGATAGACAAGGTGATAATATTTATGTCCATTAG TTTATAAGGATATTAGTATA
Downstream 100 bases:
>100_bases GGATTCGTGATGAATTTAATTAAATTGCTTATCGTCAGTGCAGCCTTATTTGCTGTATCTGGATGCGGGTATAACAGCGG TGTAAAATCAGAAGCTTCTG
Product: curli production assembly/transport protein CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MNKALPLIFVMCASLTTACATVNKKQVVTTAQPAAAISATQTEVALNTKLLKRKVAIGRFTNETTYGQGFFIDEDNNRIG KQAMDILSSKLFQTGKFIMLERADLGKIEKELAMGGNSTLKNAADYLIVGSITEFGRKEVSDVGVFSRVKKQEANAKVNI RIVDVATGLIIYSEEGKGIAYSEAGSVMGVGDKAGYDSSLNDKVLDVAITNLASNIIENMLDKPWQSYILSYEEGSLIIS GGSSQNITPGTLFEIIKEGKKVKNPQTGMFITLPGKAIGTIEVTASFGNTPESEVSFGTIVSGNLDQYIKDQDYTGLFIQ EMK
Sequences:
>Translated_323_residues MNKALPLIFVMCASLTTACATVNKKQVVTTAQPAAAISATQTEVALNTKLLKRKVAIGRFTNETTYGQGFFIDEDNNRIG KQAMDILSSKLFQTGKFIMLERADLGKIEKELAMGGNSTLKNAADYLIVGSITEFGRKEVSDVGVFSRVKKQEANAKVNI RIVDVATGLIIYSEEGKGIAYSEAGSVMGVGDKAGYDSSLNDKVLDVAITNLASNIIENMLDKPWQSYILSYEEGSLIIS GGSSQNITPGTLFEIIKEGKKVKNPQTGMFITLPGKAIGTIEVTASFGNTPESEVSFGTIVSGNLDQYIKDQDYTGLFIQ EMK >Mature_323_residues MNKALPLIFVMCASLTTACATVNKKQVVTTAQPAAAISATQTEVALNTKLLKRKVAIGRFTNETTYGQGFFIDEDNNRIG KQAMDILSSKLFQTGKFIMLERADLGKIEKELAMGGNSTLKNAADYLIVGSITEFGRKEVSDVGVFSRVKKQEANAKVNI RIVDVATGLIIYSEEGKGIAYSEAGSVMGVGDKAGYDSSLNDKVLDVAITNLASNIIENMLDKPWQSYILSYEEGSLIIS GGSSQNITPGTLFEIIKEGKKVKNPQTGMFITLPGKAIGTIEVTASFGNTPESEVSFGTIVSGNLDQYIKDQDYTGLFIQ EMK
Specific function: Unknown
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 - InterPro: IPR007195 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 34833; Mature: 34833
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKALPLIFVMCASLTTACATVNKKQVVTTAQPAAAISATQTEVALNTKLLKRKVAIGRF CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCC TNETTYGQGFFIDEDNNRIGKQAMDILSSKLFQTGKFIMLERADLGKIEKELAMGGNSTL CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHH KNAADYLIVGSITEFGRKEVSDVGVFSRVKKQEANAKVNIRIVDVATGLIIYSEEGKGIA HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCEEE YSEAGSVMGVGDKAGYDSSLNDKVLDVAITNLASNIIENMLDKPWQSYILSYEEGSLIIS EECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEE GGSSQNITPGTLFEIIKEGKKVKNPQTGMFITLPGKAIGTIEVTASFGNTPESEVSFGTI CCCCCCCCHHHHHHHHHCCHHCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCEEEE VSGNLDQYIKDQDYTGLFIQEMK EECCHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MNKALPLIFVMCASLTTACATVNKKQVVTTAQPAAAISATQTEVALNTKLLKRKVAIGRF CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCC TNETTYGQGFFIDEDNNRIGKQAMDILSSKLFQTGKFIMLERADLGKIEKELAMGGNSTL CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHH KNAADYLIVGSITEFGRKEVSDVGVFSRVKKQEANAKVNIRIVDVATGLIIYSEEGKGIA HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCEEE YSEAGSVMGVGDKAGYDSSLNDKVLDVAITNLASNIIENMLDKPWQSYILSYEEGSLIIS EECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEE GGSSQNITPGTLFEIIKEGKKVKNPQTGMFITLPGKAIGTIEVTASFGNTPESEVSFGTI CCCCCCCCHHHHHHHHHCCHHCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCEEEE VSGNLDQYIKDQDYTGLFIQEMK EECCHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]