| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yigA [C]
Identifier: 160877192
GI number: 160877192
Start: 4821265
End: 4821894
Strand: Reverse
Name: yigA [C]
Synonym: Sbal195_4088
Alternate gene names: 160877192
Gene position: 4821894-4821265 (Counterclockwise)
Preceding gene: 160877193
Following gene: 160877191
Centisome position: 90.17
GC content: 48.89
Gene sequence:
>630_bases ATGACAGAGCCCTTGATGCCGCAGACGGATGTGCCTTTCGATGAGTTGATTATTCGCGAATATCTGCTGGATAATCCCGA CTTTTTTAATCGCTATCCCGAGCTGCTGCTGGCGATGCGCTTGCCTCACATGGAACGCGGCGCCATCTCTTTGGTGGAAC GTCGCCAAGAAATGCTGCGCCAGCGAGTGAGCCAGTTGGAAGAAGAAATCACTAGCCTGTTAACCATGGCGGCGCGTAAC GAGAAGATTTACCAATTCAATACCGAGTTATCCTTCCAGCTATTAAATTGTGCCGATCTAGTGTCACTTAAAGAAGTGTT GGCCGACAGTTTGAAATTACAGTTTAATTTCAGCCATGTGCGTTTGATCAGCGTGCTCGATACCGATATGAAGGCAATAT GGGATCAAAGGCTGCATAAAGGTCACTATTTTGGCCGGCTCACGCAGCAAGAGGCTAAACGCCTATTTGGTAGCGAAGTG GGGTCAGTGGCACTGACGAAATTGTCGGAAGACAACCCAGTCATTTTTGCTATTGCCAGCCAAGATGCCACCCATTTTCA TCCCGATATGGATAACATGCTGCTGGAACAACTGCGGCGTTTGCTGGCGCACATGCTCGCTAAGCTGTAA
Upstream 100 bases:
>100_bases ATTTACCCGGCGGCACCTTAACCATCAACTGGGAAGGCGAGGGTAAACCTTTGTGGATGACGGGCCCTGCGCAGCACGTT TACGATGGACAAATTCAGTT
Downstream 100 bases:
>100_bases CGGCCGTCGAGCGATTGTGCTCACCTAAGGCTTGGGAAAACCCATGAGGAAACCGATATGAGTACGCAAACAGCCGAAGT GTCGGCGCTTAATACTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTEPLMPQTDVPFDELIIREYLLDNPDFFNRYPELLLAMRLPHMERGAISLVERRQEMLRQRVSQLEEEITSLLTMAARN EKIYQFNTELSFQLLNCADLVSLKEVLADSLKLQFNFSHVRLISVLDTDMKAIWDQRLHKGHYFGRLTQQEAKRLFGSEV GSVALTKLSEDNPVIFAIASQDATHFHPDMDNMLLEQLRRLLAHMLAKL
Sequences:
>Translated_209_residues MTEPLMPQTDVPFDELIIREYLLDNPDFFNRYPELLLAMRLPHMERGAISLVERRQEMLRQRVSQLEEEITSLLTMAARN EKIYQFNTELSFQLLNCADLVSLKEVLADSLKLQFNFSHVRLISVLDTDMKAIWDQRLHKGHYFGRLTQQEAKRLFGSEV GSVALTKLSEDNPVIFAIASQDATHFHPDMDNMLLEQLRRLLAHMLAKL >Mature_208_residues TEPLMPQTDVPFDELIIREYLLDNPDFFNRYPELLLAMRLPHMERGAISLVERRQEMLRQRVSQLEEEITSLLTMAARNE KIYQFNTELSFQLLNCADLVSLKEVLADSLKLQFNFSHVRLISVLDTDMKAIWDQRLHKGHYFGRLTQQEAKRLFGSEVG SVALTKLSEDNPVIFAIASQDATHFHPDMDNMLLEQLRRLLAHMLAKL
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24344; Mature: 24212
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLMPQTDVPFDELIIREYLLDNPDFFNRYPELLLAMRLPHMERGAISLVERRQEMLR CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QRVSQLEEEITSLLTMAARNEKIYQFNTELSFQLLNCADLVSLKEVLADSLKLQFNFSHV HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHH RLISVLDTDMKAIWDQRLHKGHYFGRLTQQEAKRLFGSEVGSVALTKLSEDNPVIFAIAS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC QDATHFHPDMDNMLLEQLRRLLAHMLAKL CCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEPLMPQTDVPFDELIIREYLLDNPDFFNRYPELLLAMRLPHMERGAISLVERRQEMLR CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QRVSQLEEEITSLLTMAARNEKIYQFNTELSFQLLNCADLVSLKEVLADSLKLQFNFSHV HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHH RLISVLDTDMKAIWDQRLHKGHYFGRLTQQEAKRLFGSEVGSVALTKLSEDNPVIFAIAS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC QDATHFHPDMDNMLLEQLRRLLAHMLAKL CCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA