BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is rhlB [H]

Identifier: 160877173

GI number: 160877173

Start: 4800934

End: 4802250

Strand: Reverse

Name: rhlB [H]

Synonym: Sbal195_4069

Alternate gene names: 160877173

Gene position: 4802250-4800934 (Counterclockwise)

Preceding gene: 160877176

Following gene: 160877172

Centisome position: 89.81

GC content: 45.18

Gene sequence:

>1317_bases
ATGAGCGAAACACATCTATCTACCCAAAGGTTTGCCGACCTACCTCTACATCCTGAGGTTAAACAGGCCCTTGCCGAGAA
TGGCTTCGAATTTTGTACGCCGATCCAGGCGTTATCACTGCCTGTATTACTTCAATCAAAAGATATCGCTGGTCAAGCAC
AAACGGGCACTGGCAAGACAATGGCCTTTTTGGTCGCCACTTTTAATCACTTATTATCGACTCCCGTACCTGAAGGTCGA
CTGATTAATCAGCCCCGCGCCATCATTATGGCTCCGACTCGCGAACTGGCGATTCAGATTGCTAAAGATGCGATTTTACT
CGCTAAACACACTCACTTAAAGGTGGGTATTGTTTATGGCGGCGAAAGTTACGATGTACAGCGTAAAGTATTAGATCAAG
GTGTTGATATCTTGATTGGTACTACGGGTCGAATTATCGACTACGTTCGCCAAGGCATTATCGGTCTGAATTCGATTCAG
GCTGTAGTATTAGATGAAGCCGATCGTATGTTCGATCTAGGTTTTATCAAAGATATCCGCTTCTTGTTTAGACGTATGCC
TGAGGCAAATCAACGTCTTAATATGCTATTTTCGGCAACCTTGTCGATGAAAGTGCAAGAGCTGGCTTACGATCATATGA
ACGAGCCGGTTAAAGTCGAAATCGCCCCTGAAGAAAAAACCTCTAAAAATATCAAAGAAGAAATCTTCTATCCTTCGCAA
GAAGAGAAGATGCGTTTGTTGTTGACCTTGATTGAAGAAGATTGGCCAGAAAAAGCCATCGTTTTCTCTAACACTAAGCA
CAGCTGTGAAACGCTTTGGTCTTGGCTTGAAGGTGACGGACATCGCGTGGGTTTGTTAACGGGTGATGTGCCACAGAAAA
AACGTATTCGTATTCTTGAGCAGTTTACCAGTGGCCAATTAGATATATTGGTTGCTACCGATGTTGCGGCTCGTGGTTTA
CATATTTCTGACGTATCACACGTGTATAACTATGATTTACCTGATGATTGTGAAGACTATGTTCACCGAATTGGTCGTAC
GGGTCGCGCGGGTAATAAGGGCATGTCGATAAGCTTTGCCTGTGAAGAGTACGCGCTAAACTTGCCAGCAATCGAAAGCT
ATATTAATCATTCGATTCCAGTGAGTAATTACGACAGTGAAGCTTTATTGGCCGATATTCCAACACCAGCGAAGATCCAC
CGTAAACACCCGAGCGGCACTCGAAACCTGCGTGATCGTTCTGGGGCAAGTCGTCCAGGTGCGCAACGCAGTGGTGCTCG
CCCTCCTCGTCATGATAGGACACGTAGACATTCGTAA

Upstream 100 bases:

>100_bases
TATTGGGGCTGAAAAATAGCTTTTCAAGTTACCTTTTTACAATGTGGCTATTTCAAACGATCGAGTATCTTATTGCAACC
TCAACAGGTAAGCTTGCGCT

Downstream 100 bases:

>100_bases
ATGCCAACACCCGCTTATGCCGCTATAACATTAGGCTCAAATAGTTTTAATATGCTGATCGCCAAAACGCGTGGTGGTCA
GCCGCATATTATTGCGAAAT

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSETHLSTQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPEGR
LINQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ
EEKMRLLLTLIEEDWPEKAIVFSNTKHSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGL
HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEEYALNLPAIESYINHSIPVSNYDSEALLADIPTPAKIH
RKHPSGTRNLRDRSGASRPGAQRSGARPPRHDRTRRHS

Sequences:

>Translated_438_residues
MSETHLSTQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPEGR
LINQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ
EEKMRLLLTLIEEDWPEKAIVFSNTKHSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGL
HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEEYALNLPAIESYINHSIPVSNYDSEALLADIPTPAKIH
RKHPSGTRNLRDRSGASRPGAQRSGARPPRHDRTRRHS
>Mature_437_residues
SETHLSTQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPEGRL
INQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQA
VVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQE
EKMRLLLTLIEEDWPEKAIVFSNTKHSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLH
ISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEEYALNLPAIESYINHSIPVSNYDSEALLADIPTPAKIHR
KHPSGTRNLRDRSGASRPGAQRSGARPPRHDRTRRHS

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI301171467, Length=344, Percent_Identity=38.953488372093, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI87196351, Length=344, Percent_Identity=38.953488372093, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI301171475, Length=344, Percent_Identity=38.953488372093, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI41327771, Length=403, Percent_Identity=36.4764267990074, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=36.3143631436314, Blast_Score=234, Evalue=9e-62,
Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=36.3143631436314, Blast_Score=234, Evalue=9e-62,
Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=38.6486486486486, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=38.0681818181818, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=38.0681818181818, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=35.3107344632768, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=35.3107344632768, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=35.3107344632768, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=35.3107344632768, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI21071032, Length=386, Percent_Identity=32.9015544041451, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=37.3937677053824, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=33.5120643431635, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=35.2272727272727, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=35.2272727272727, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI55749865, Length=382, Percent_Identity=34.5549738219895, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=35.2941176470588, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI51094101, Length=366, Percent_Identity=33.879781420765, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI164419743, Length=366, Percent_Identity=33.879781420765, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=36.2857142857143, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI164664518, Length=398, Percent_Identity=31.4070351758794, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=35.6955380577428, Blast_Score=191, Evalue=8e-49,
Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=33.3333333333333, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI50659095, Length=416, Percent_Identity=33.1730769230769, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=32.2128851540616, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=32.2128851540616, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=32.4929971988796, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=32.4675324675325, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=32.2077922077922, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI13129006, Length=359, Percent_Identity=33.1476323119777, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI38327634, Length=343, Percent_Identity=32.9446064139942, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI62241022, Length=364, Percent_Identity=32.4175824175824, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=31.4121037463977, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=32.6315789473684, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=32.9758713136729, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=32.4396782841823, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI62241024, Length=343, Percent_Identity=32.3615160349854, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI17505907, Length=493, Percent_Identity=29.4117647058824, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38569503, Length=374, Percent_Identity=29.4117647058824, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38569505, Length=374, Percent_Identity=29.4117647058824, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI41327776, Length=386, Percent_Identity=30.5699481865285, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI164419732, Length=367, Percent_Identity=31.6076294277929, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI13514831, Length=355, Percent_Identity=29.8591549295775, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI9506931, Length=409, Percent_Identity=28.1173594132029, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=29.4573643410853, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=28.7671232876712, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=27.0531400966184, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=29.7124600638978, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI4826686, Length=340, Percent_Identity=31.1764705882353, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI20336298, Length=228, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=5e-27,
Organism=Escherichia coli, GI1790214, Length=425, Percent_Identity=67.5294117647059, Blast_Score=593, Evalue=1e-171,
Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=39.7849462365591, Blast_Score=274, Evalue=8e-75,
Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=39.3530997304582, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI1788930, Length=365, Percent_Identity=38.0821917808219, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1787605, Length=385, Percent_Identity=35.0649350649351, Blast_Score=218, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=40.2739726027397, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=40.2739726027397, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=40.2739726027397, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=40.2203856749311, Blast_Score=248, Evalue=4e-66,
Organism=Caenorhabditis elegans, GI32565321, Length=366, Percent_Identity=36.6120218579235, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17507877, Length=414, Percent_Identity=34.7826086956522, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=36.0526315789474, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=32.7027027027027, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=32.7027027027027, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=35.3723404255319, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=37.2093023255814, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI115533224, Length=353, Percent_Identity=34.2776203966006, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17552642, Length=418, Percent_Identity=33.0143540669856, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=337, Percent_Identity=35.3115727002967, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.4086021505376, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=31.758530183727, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17555296, Length=353, Percent_Identity=33.1444759206799, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI115532548, Length=457, Percent_Identity=29.7592997811816, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=31.6195372750643, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17537549, Length=347, Percent_Identity=37.463976945245, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17509811, Length=384, Percent_Identity=32.2916666666667, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=30.4812834224599, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=30.9973045822102, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71999646, Length=386, Percent_Identity=30.8290155440415, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI71999644, Length=397, Percent_Identity=30.2267002518892, Blast_Score=174, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=390, Percent_Identity=32.8205128205128, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=390, Percent_Identity=32.8205128205128, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17505370, Length=353, Percent_Identity=33.1444759206799, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17536103, Length=390, Percent_Identity=32.8205128205128, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=32.3529411764706, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=32.7956989247312, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=27.2727272727273, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=30.6122448979592, Blast_Score=154, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=30.4812834224599, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI193206561, Length=359, Percent_Identity=28.9693593314763, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=413, Percent_Identity=25.6658595641646, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17556951, Length=404, Percent_Identity=27.4752475247525, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=27.6422764227642, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.969696969697, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71997889, Length=491, Percent_Identity=25.6619144602851, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=47.4226804123711, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17557982, Length=380, Percent_Identity=22.1052631578947, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=38.4401114206128, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6324778, Length=397, Percent_Identity=36.7758186397985, Blast_Score=240, Evalue=3e-64,
Organism=Saccharomyces cerevisiae, GI6324217, Length=362, Percent_Identity=36.7403314917127, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=338, Percent_Identity=37.8698224852071, Blast_Score=220, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=34.0720221606648, Blast_Score=203, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=400, Percent_Identity=31, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320449, Length=380, Percent_Identity=33.1578947368421, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=34.1968911917098, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=31.6489361702128, Blast_Score=191, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=367, Percent_Identity=33.5149863760218, Blast_Score=189, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=389, Percent_Identity=34.1902313624679, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=389, Percent_Identity=34.1902313624679, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=393, Percent_Identity=32.0610687022901, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=33.7047353760446, Blast_Score=176, Evalue=8e-45,
Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=31.1653116531165, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6321963, Length=389, Percent_Identity=31.3624678663239, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=29.5774647887324, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=396, Percent_Identity=31.8181818181818, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6320173, Length=435, Percent_Identity=30.3448275862069, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=378, Percent_Identity=30.952380952381, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=29.7752808988764, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6319618, Length=412, Percent_Identity=30.3398058252427, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=423, Percent_Identity=25.7683215130024, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322876, Length=412, Percent_Identity=28.1553398058252, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=26.9662921348315, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=38.3783783783784, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=37.037037037037, Blast_Score=237, Evalue=9e-63,
Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=36.4145658263305, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI28574962, Length=344, Percent_Identity=38.3720930232558, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.3099730458221, Blast_Score=221, Evalue=7e-58,
Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.3099730458221, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=35.3099730458221, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=35.3099730458221, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644487, Length=370, Percent_Identity=35.4054054054054, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI45551833, Length=370, Percent_Identity=35.4054054054054, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644485, Length=370, Percent_Identity=35.4054054054054, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24584994, Length=388, Percent_Identity=36.0824742268041, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=33.7837837837838, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=35.4929577464789, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=36.3143631436314, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=35.989010989011, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=33.1460674157303, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=36.9186046511628, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI28575014, Length=382, Percent_Identity=30.8900523560209, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24585582, Length=414, Percent_Identity=30.4347826086957, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24642822, Length=409, Percent_Identity=31.7848410757946, Blast_Score=183, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24583281, Length=369, Percent_Identity=30.3523035230352, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24583279, Length=369, Percent_Identity=30.3523035230352, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=32.6815642458101, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=32.6815642458101, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=32.6815642458101, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24582080, Length=379, Percent_Identity=32.4538258575198, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24582078, Length=379, Percent_Identity=32.4538258575198, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI17136248, Length=379, Percent_Identity=32.4538258575198, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24582075, Length=379, Percent_Identity=32.4538258575198, Blast_Score=179, Evalue=5e-45,
Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=32.378223495702, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=32.378223495702, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI19920478, Length=351, Percent_Identity=31.6239316239316, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI17136814, Length=376, Percent_Identity=32.7127659574468, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=36.3934426229508, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=30.5630026809651, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI20130173, Length=431, Percent_Identity=29.6983758700696, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24643725, Length=419, Percent_Identity=28.1622911694511, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI17647335, Length=362, Percent_Identity=30.6629834254144, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI21355559, Length=396, Percent_Identity=31.5656565656566, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=30.5810397553517, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI17136666, Length=414, Percent_Identity=26.5700483091787, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI18859659, Length=260, Percent_Identity=31.5384615384615, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI28571338, Length=260, Percent_Identity=31.5384615384615, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=23.3618233618234, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49086; Mature: 48955

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETHLSTQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKT
CCCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH
MAFLVATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCEEEEEEEEC
GESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIR
CCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHH
FLFRRMPEANQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCH
EEKMRLLLTLIEEDWPEKAIVFSNTKHSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILE
HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFA
HHCCCCEEEEEEECHHHCCCEEHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIESYINHSIPVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGASRPG
HHHHHCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCHHCCCCCCCC
AQRSGARPPRHDRTRRHS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETHLSTQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKT
CCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH
MAFLVATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTHLKVGIVYG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCEEEEEEEEC
GESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIR
CCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHH
FLFRRMPEANQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCH
EEKMRLLLTLIEEDWPEKAIVFSNTKHSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILE
HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFA
HHCCCCEEEEEEECHHHCCCEEHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIESYINHSIPVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGASRPG
HHHHHCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCHHCCCCCCCC
AQRSGARPPRHDRTRRHS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]