Click here to switch to the map view.

The map label for this gene is bdlA [H]

Identifier: 160876967

GI number: 160876967

Start: 4553020

End: 4554324

Strand: Direct

Name: bdlA [H]

Synonym: Sbal195_3863

Alternate gene names: 160876967

Gene position: 4553020-4554324 (Clockwise)

Preceding gene: 160876966

Following gene: 160876975

Centisome position: 85.15

GC content: 45.67

Gene sequence:

>1305_bases
GTGTTCAATTCTTCATTACGTAAAAGCCTAGAAGTGAGCGAAAACAAGCGCCAAGAAGCGGAGTCGGTCATCGACGCCAT
TAAGCAAAGTATTGCCACGGTAGAATTTACGCCTGAAGGAAAAGTGCTCGATGCGAATGCCTTGTTTTTAAAAGTAGTCG
GTTATTCGCTTAATGAAGTTGTTGGTCAACACCATAAGCTGTTTTGCTCAGCGACCTATGCTAATTCTCCTGCCTACCAA
CAATTTTGGAGTAATTTAAAAGCCGGTCATCCACAGGAGGGACATTTCGCGCGAGTGAATAAAAATGGCCAAGAAATCTG
GCTAAGGGCGACTTACTTTCCTGTAAAACAGGCGGGGGAAGTCGTGAAGATAATGAAAACGGCTTCTGAAATTACCCAAT
ATAAGCAACAGCTTGACGATCAATCCGCCATCTTTGATGCCCTAAATCGCTCCCAAGCTATTATTGAATTTACCCCAGAT
GGCACTATCCTGAAGGCAAATGCCAACTTTTTAAAAACAATGGGATACAGCAAAGAACAGATCTTGGGTAAGCATCATAG
AATTTTCTGTTTCGATGAATTTTATCGACAAAATCCTCACTTTTGGGACGAGCTTAAGCAAGGTCGCTATAGCAAAGGGC
TATTTGAGCGCAAAAATGCCTATGGCGACTCAATTTGGCTGGAGGCGGCTTACAATCCCATTATGGATGAGCATGGAAAG
GTCGTTAAAGTTGTTAAGTTCGCCAGTGATATCAGCAAGCGGATCGAGCAAAGCCACGCTGTGCGTGAAGCCGCAAATAT
TGCGCTCACCACATCGCAACGTACCGTTGAGCAAGCGGAACAAGGCGTTAAGTTGCTTAATGCGACCGTCAATACCTCCA
ATGCCATTGCTGAGCAAACCCATAAAACGACTCAGGCGATTACTCAACTGAATGAGCAATCCCAAAGTATTCAAGCCATA
GTCGCGACCATTAGCTCAATTGCCGATCAAACCAATTTGCTGGCATTAAATGCCGCGATTGAGGCCGCGCGTGCGGGTGA
ACAAGGCCGAGGTTTTGCGGTTGTCGCCGATGAAGTGAGGCAGCTCGCTTCCAGAACCAGTAAATCAACCAGTGAAATTG
CCGCCGTCGTCACTAAAAATACCCAGCTCACCACAAGTGCAACAGACATGATGAACGAAGTTGAAGGTATCGCACAGGAA
GGGAAACAACAGTTAGCCGAGGTAACTTTGGTGATGGGAGAAATACGCAACGGGGCAGAAAACGTCTCACAAATCGTCTC
TCAACTTTCAATCAACGGTCATTAA

Upstream 100 bases:

>100_bases
AAATCACAGCTATATTTATCTGTGTATCCAGCTCGTTATATCGAGCTTTCAATAAAGACCAGCGGTTTTTGAGTCAGTTA
AGCTCATCAGGAGTATCTCA

Downstream 100 bases:

>100_bases
TCCCCTCGCATTTCATCGCGCTATCAAGGATTGCATGGCGCTTTATCTGCAGACAAAACGCCATGTGACTGTTCCGTCAA
TCAATAATCAGTTTTACTAC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFNSSLRKSLEVSENKRQEAESVIDAIKQSIATVEFTPEGKVLDANALFLKVVGYSLNEVVGQHHKLFCSATYANSPAYQ
QFWSNLKAGHPQEGHFARVNKNGQEIWLRATYFPVKQAGEVVKIMKTASEITQYKQQLDDQSAIFDALNRSQAIIEFTPD
GTILKANANFLKTMGYSKEQILGKHHRIFCFDEFYRQNPHFWDELKQGRYSKGLFERKNAYGDSIWLEAAYNPIMDEHGK
VVKVVKFASDISKRIEQSHAVREAANIALTTSQRTVEQAEQGVKLLNATVNTSNAIAEQTHKTTQAITQLNEQSQSIQAI
VATISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKSTSEIAAVVTKNTQLTTSATDMMNEVEGIAQE
GKQQLAEVTLVMGEIRNGAENVSQIVSQLSINGH

Sequences:

>Translated_434_residues
MFNSSLRKSLEVSENKRQEAESVIDAIKQSIATVEFTPEGKVLDANALFLKVVGYSLNEVVGQHHKLFCSATYANSPAYQ
QFWSNLKAGHPQEGHFARVNKNGQEIWLRATYFPVKQAGEVVKIMKTASEITQYKQQLDDQSAIFDALNRSQAIIEFTPD
GTILKANANFLKTMGYSKEQILGKHHRIFCFDEFYRQNPHFWDELKQGRYSKGLFERKNAYGDSIWLEAAYNPIMDEHGK
VVKVVKFASDISKRIEQSHAVREAANIALTTSQRTVEQAEQGVKLLNATVNTSNAIAEQTHKTTQAITQLNEQSQSIQAI
VATISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKSTSEIAAVVTKNTQLTTSATDMMNEVEGIAQE
GKQQLAEVTLVMGEIRNGAENVSQIVSQLSINGH
>Mature_434_residues
MFNSSLRKSLEVSENKRQEAESVIDAIKQSIATVEFTPEGKVLDANALFLKVVGYSLNEVVGQHHKLFCSATYANSPAYQ
QFWSNLKAGHPQEGHFARVNKNGQEIWLRATYFPVKQAGEVVKIMKTASEITQYKQQLDDQSAIFDALNRSQAIIEFTPD
GTILKANANFLKTMGYSKEQILGKHHRIFCFDEFYRQNPHFWDELKQGRYSKGLFERKNAYGDSIWLEAAYNPIMDEHGK
VVKVVKFASDISKRIEQSHAVREAANIALTTSQRTVEQAEQGVKLLNATVNTSNAIAEQTHKTTQAITQLNEQSQSIQAI
VATISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKSTSEIAAVVTKNTQLTTSATDMMNEVEGIAQE
GKQQLAEVTLVMGEIRNGAENVSQIVSQLSINGH

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=208, Percent_Identity=35.0961538461538, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1788195, Length=194, Percent_Identity=34.5360824742268, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI2367378, Length=194, Percent_Identity=34.5360824742268, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1787690, Length=193, Percent_Identity=36.2694300518135, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789453, Length=145, Percent_Identity=38.6206896551724, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 48043; Mature: 48043

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNSSLRKSLEVSENKRQEAESVIDAIKQSIATVEFTPEGKVLDANALFLKVVGYSLNEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHCCCHHHH
VGQHHKLFCSATYANSPAYQQFWSNLKAGHPQEGHFARVNKNGQEIWLRATYFPVKQAGE
HCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHH
VVKIMKTASEITQYKQQLDDQSAIFDALNRSQAIIEFTPDGTILKANANFLKTMGYSKEQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHCCCCHHH
ILGKHHRIFCFDEFYRQNPHFWDELKQGRYSKGLFERKNAYGDSIWLEAAYNPIMDEHGK
HCCCCCEEEEEHHHHHCCCCHHHHHHCCCHHCCHHHHHCCCCCCEEEEHHCCCHHHCCCC
VVKVVKFASDISKRIEQSHAVREAANIALTTSQRTVEQAEQGVKLLNATVNTSNAIAEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HKTTQAITQLNEQSQSIQAIVATISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCEEEHHHHHH
QLASRTSKSTSEIAAVVTKNTQLTTSATDMMNEVEGIAQEGKQQLAEVTLVMGEIRNGAE
HHHHHCCCCHHHHHHHEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NVSQIVSQLSINGH
HHHHHHHHHCCCCC
>Mature Secondary Structure
MFNSSLRKSLEVSENKRQEAESVIDAIKQSIATVEFTPEGKVLDANALFLKVVGYSLNEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHCCCHHHH
VGQHHKLFCSATYANSPAYQQFWSNLKAGHPQEGHFARVNKNGQEIWLRATYFPVKQAGE
HCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHHH
VVKIMKTASEITQYKQQLDDQSAIFDALNRSQAIIEFTPDGTILKANANFLKTMGYSKEQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHCCCCHHH
ILGKHHRIFCFDEFYRQNPHFWDELKQGRYSKGLFERKNAYGDSIWLEAAYNPIMDEHGK
HCCCCCEEEEEHHHHHCCCCHHHHHHCCCHHCCHHHHHCCCCCCEEEEHHCCCHHHCCCC
VVKVVKFASDISKRIEQSHAVREAANIALTTSQRTVEQAEQGVKLLNATVNTSNAIAEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HKTTQAITQLNEQSQSIQAIVATISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCEEEHHHHHH
QLASRTSKSTSEIAAVVTKNTQLTTSATDMMNEVEGIAQEGKQQLAEVTLVMGEIRNGAE
HHHHHCCCCHHHHHHHEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NVSQIVSQLSINGH
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]