| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876848
Identifier: 160876848
GI number: 160876848
Start: 4411560
End: 4412144
Strand: Direct
Name: 160876848
Synonym: Sbal195_3744
Alternate gene names: NA
Gene position: 4411560-4412144 (Clockwise)
Preceding gene: 160876847
Following gene: 160876849
Centisome position: 82.5
GC content: 48.38
Gene sequence:
>585_bases ATGACGTTAACGCCGCTTTCCCGTGAACAACAGCTTGAGCAACTGATCAATAGCGCCCCCAAAGAAATGTCGCCCAGCCA TGATCTGTGGCAAGGCATTGAAAAGCGCATGGACAAACCGCTGGTTTCCCAAACACGCCAATCCCAGAACGGCCGACAGT GGGCGATAGCAGCCTCTTTTATCATGCTAGTGGCATTGGGATATAGCCAATTGCCTTATTTCAATCAATTAACCACACAG CAGACAGAGCTTGCCCAAAACTCAGCTATGCCAGAGCAACAAGGGGATGCGGCCTTACAATTATTACTCACTCAAATTGC AGCATCGCACCAAGTGCAAGTGGATAACCTAGAGCAAACAACGAATGCACTAGCTTGGCAGACCAGCAGCTTTAGCGCGC CCGTTGAGCAAGGTTTGGCTGAACTAAGACGGGCGGCAACTCAGATTTACCAAGCTTTACAAGCAAATCCAACCGATAAA CAACTTTGGCAACTCTGGATTTGGGTGCAGCAGCGTGAGCTCGACCTATTACAACAGGGCCAAAAATTACCCATTAAAAA CTCGACACAAGGAAATACCCTATGA
Upstream 100 bases:
>100_bases GTTATCAACATGATGAAATCGCTGACTTACTTGGCATTGCGGTCGGCACTAGCAAGACCCAATACCATAGAGCTAAGCAA CTACTACAGGAGATGCTGTA
Downstream 100 bases:
>100_bases GTAACCTCAATCTCACTAAAACCAGTCTATTAGTTTCGACACTCTATTTAGGTTTAATGGGCAATGTGTTTGCAGCGCAA AGCATTGATAAACAGCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTLTPLSREQQLEQLINSAPKEMSPSHDLWQGIEKRMDKPLVSQTRQSQNGRQWAIAASFIMLVALGYSQLPYFNQLTTQ QTELAQNSAMPEQQGDAALQLLLTQIAASHQVQVDNLEQTTNALAWQTSSFSAPVEQGLAELRRAATQIYQALQANPTDK QLWQLWIWVQQRELDLLQQGQKLPIKNSTQGNTL
Sequences:
>Translated_194_residues MTLTPLSREQQLEQLINSAPKEMSPSHDLWQGIEKRMDKPLVSQTRQSQNGRQWAIAASFIMLVALGYSQLPYFNQLTTQ QTELAQNSAMPEQQGDAALQLLLTQIAASHQVQVDNLEQTTNALAWQTSSFSAPVEQGLAELRRAATQIYQALQANPTDK QLWQLWIWVQQRELDLLQQGQKLPIKNSTQGNTL >Mature_193_residues TLTPLSREQQLEQLINSAPKEMSPSHDLWQGIEKRMDKPLVSQTRQSQNGRQWAIAASFIMLVALGYSQLPYFNQLTTQQ TELAQNSAMPEQQGDAALQLLLTQIAASHQVQVDNLEQTTNALAWQTSSFSAPVEQGLAELRRAATQIYQALQANPTDKQ LWQLWIWVQQRELDLLQQGQKLPIKNSTQGNTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21910; Mature: 21779
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTPLSREQQLEQLINSAPKEMSPSHDLWQGIEKRMDKPLVSQTRQSQNGRQWAIAASF CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH IMLVALGYSQLPYFNQLTTQQTELAQNSAMPEQQGDAALQLLLTQIAASHQVQVDNLEQT HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH TNALAWQTSSFSAPVEQGLAELRRAATQIYQALQANPTDKQLWQLWIWVQQRELDLLQQG HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC QKLPIKNSTQGNTL CCCCCCCCCCCCCC >Mature Secondary Structure TLTPLSREQQLEQLINSAPKEMSPSHDLWQGIEKRMDKPLVSQTRQSQNGRQWAIAASF CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH IMLVALGYSQLPYFNQLTTQQTELAQNSAMPEQQGDAALQLLLTQIAASHQVQVDNLEQT HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH TNALAWQTSSFSAPVEQGLAELRRAATQIYQALQANPTDKQLWQLWIWVQQRELDLLQQG HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC QKLPIKNSTQGNTL CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA